Salvia splendens (scarlet sage): 121779997
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Entry
121779997 CDS
T07627
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121779997
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sspl01009
]
121779997
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121779997
03036 Chromosome and associated proteins [BR:
sspl03036
]
121779997
Protein phosphatases and associated proteins [BR:
sspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121779997
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121779997
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121779997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ComGF
Motif
Other DBs
NCBI-GeneID:
121779997
NCBI-ProteinID:
XP_042033445
LinkDB
All DBs
Position
19:5135087..5142926
Genome browser
AA seq
517 aa
AA seq
DB search
MHGGDGREVASAAAGPPTPLEWKFSQVFGERAAGEEVQEVDIISVIEFDKSGNHLATGDR
GGRVVLFERTDAKEHGGNPRDLERMDQVSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKIN
KIRWCQTANGAVFLLSTNDKTIKYWKVQEKKVKKISEIKVDSGKAAGNGGIASSSNSSKS
KQFSANGGYSDRSYNPLSKELSFPPGGLPSLRLPVVVTSGETSLVARCRRVYAHAHDYHI
NSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPTHCN
TLAYSSSKGSIRLIDLRQSALCDSHSKIFEEQEAPGSRSFFTEIIASISDVKFARDGRYL
LSRDYMSLKLWDVNMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATG
SYSNLFRIFGCAPGSTEATTLEASKNPMRRQIQTPARPSRSLTSSISRVVRRGAESPGPD
ANGNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcacggtggtgacggtagagaggtggcatcagctgccgccggtccacctacgccgctg
gaatggaaattttctcaggtctttggcgagcgagcggctggcgaagaagtacaagaagtg
gatatcatctctgtcatcgagtttgataaaagtggcaaccatctggctactggtgatcgc
ggtggaagggtggttttatttgaaaggaccgatgcaaaagagcacggtggaaatccaaga
gatttagagaggatggaccaagtctcacgacacccggagtttcgttacaaaactgaattt
cagagtcacgaacctgagtttgactatctcaagagtttggagattgaggagaaaatcaac
aagatcagatggtgccagacagccaatggtgctgtctttctcctgtcaactaatgacaaa
accattaagtattggaaggtccaagagaagaaggtgaagaaaatttctgaaataaaagtt
gactcgggtaaagctgctggaaacggtggtattgcaagttctagcaactcttctaaatcc
aaacagttttctgctaatggaggctattcagatcgttcttacaatcctttgagcaaagaa
ttgtcctttcctcctgggggactcccctctctacgattaccagtggtagtcacaagcggt
gagaccagtcttgttgcaagatgcaggagagtatatgctcatgcacatgattaccatatc
aattctatctcaaataacagtgatggtgaaacatttatatcagctgatgatctccgaata
aatctttggaacttggaaataagcaatcaaagtttcaatatagttgatgtgaaaccaaca
aatatggaggatctgactgaggtaataacgtcagcagaatttcatcctactcactgcaac
acgttagcatatagtagttcaaaaggatctattcgtcttattgatttgcgacaatctgca
ctgtgcgactcacattctaaaatatttgaggagcaggaggcaccgggttcaagatcattt
ttcactgagattattgcttcaatttcagatgttaagtttgcgagggatggcagatattta
ctgagtcgtgactacatgtcccttaagttatgggatgttaacatggattctggtccagtg
gcaactttccaggttcacgagtatttaagaccaaagctctgtgacttgtacgaaaacgat
tccatttttgataaattcgaatgctgcctgagtggtgatggtcttcgagtggctactggt
tcatatagcaatctatttcgtatatttggctgtgctcctggaagcactgaggcaactact
ctagaagcaagcaaaaacccaatgagaaggcagatccaaacccctgctcggccttccaga
tctctgaccagtagcatcagccgtgtcgtgaggcgaggtgctgaaagtccaggacctgat
gccaatgggaactcatttgatttcactactaagctgctccacctagcctggcacccatca
gaaaactcgattgcttgtgccgccgcaaatagcctgtacatgtactatgcataa
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