Salvia splendens (scarlet sage): 121787313
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Entry
121787313 CDS
T07627
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL-like isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
121787313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspl03000
]
121787313
Transcription factors [BR:
sspl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
121787313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
121787313
NCBI-ProteinID:
XP_042041938
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Position
22:24379243..24384593
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AA seq
747 aa
AA seq
DB search
MDPYSSGEDVIVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFTKLEKEAIVKGVPIGKSLDIKIPPPRPKRKPNNPYPRKTSAGTSASQVGVN
DGKISNPVSSSCQSKVTMELEKPSDDEKIGNSKEYYDKDDCFEAFTLKTAPCEFPSSANK
IASVSDAPKNSCTFRQYIPLSGEAVDQDETAASQVTTEAKGFQIEKSVNDQPLQDKLVFK
ISNDELKQSENDDTVGTADAPATQNYPRHVPVHILDGSLGMRAFDISQDTSYADSAFCQM
GGVLAPQNHFTNPAASGISEHYDSASKSSVHQSFPSYHPVFAPIQSQDDYQSFLHLSTTF
SSLIVSALSQNPLVYAAATFAATSWPSLNPEASVKQSTASAAAFQTRPVTTTPSLAALAA
ATTAAATAWWAAHGLLPLCAPYHPGFTSSPASASAAPMACSQDQAVNSEKRESSPDPALG
GQQLEPECSEALHKKQSVSKLPTLSSSDSEENEGVKLNVGLAAPGTEKAEATGELQDVDK
SKSKKPADRSSCGSNTPSSSEVEADPTEKHAEGEEEKQTEEQEKQDDIDAAMNPFGDPFN
RRCRSTINVSDSWKEVSDEGRLAFQKLFSRQVLPQSFSPPHANKGNINCLRENEKAEKGL
QLDLNSTTWGSFSQKKGEEDGASVIGENKEKEGLYTGLGQCKLSARRTGFKPYKRCSVEA
KECGVSGNGHDEEKCPKRLRVEGEAST
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggacccttattcatccggagaagatgttatcgttaagacaaggaaaccttacacaatt
actaagcagcgcgagcgatggactgaagaggagcataataggtttctagaagctctcaag
ctctatgggcgtgcttggcagcgaatagaagaacatataggaaccaagactgctgtgcag
ataagaagtcatgcacagaagttttttacaaagttggaaaaggaggccattgttaaagga
gttccaattgggaaatctcttgacatcaaaatccctccaccacggcctaaaagaaaaccg
aacaatccttatcctcggaagacaagcgcgggaacttctgcttcccaagtgggggtgaat
gatgggaaaatatcaaacccagtttcttcctcatgtcagagtaaagtaaccatggaactt
gagaaaccttccgacgatgagaaaattggaaacagtaaagaatactatgacaaggatgat
tgctttgaggctttcactctcaagacagctccctgtgaatttccatcttcagcaaacaaa
atcgcatctgtatctgatgctcctaagaactcatgtacttttaggcaatatatcccactt
tcgggagaagcagtggatcaggatgaaacagctgcatcccaggtcactactgaagccaaa
ggatttcagattgagaagtctgttaatgaccagcctcttcaggataagctcgtgttcaag
atttcaaatgatgagctgaagcagtctgaaaatgatgatacagtaggaactgccgatgcc
cctgccacacaaaattatcctcgccatgtccctgtgcacattttggatgggagcttagga
atgagggcattcgatatctcccaggatacatcgtatgcagattctgcattttgtcaaatg
ggtggcgtccttgctcctcaaaatcatttcacgaatccagctgcttctggtatttctgag
cattatgatagtgcatcaaaatcttcggttcaccagtcattccccagttatcatccagtc
ttcgctcctatccaaagtcaagatgattaccagtcgtttctgcatttatcaaccacattt
tccagtcttattgtatctgctctatcgcaaaatcctttagtctatgctgcagctaccttt
gcagcaacttcgtggccttctctgaatccggaagcttcagttaaacaatctacagcctca
gctgcggcgtttcaaacaaggcctgtaactacgactcctagtttggctgcacttgctgca
gctaccacagcagcggcaactgcatggtgggcagctcatggcctacttcctttatgtgct
ccgtatcatcctggctttacgtcttctcctgcatcagcatcggcagctccaatggcttgc
agccaagatcaagctgtaaacagtgaaaaaagagagagcagtcctgatcctgccttaggt
ggtcaacaacttgaaccagaatgctccgaggctcttcacaaaaagcaatcagtttcaaag
ttgccaacattatcatcatcagattctgaagaaaatgaaggcgtgaaactgaatgttgga
ttagccgctcctgggacagaaaaggccgaggctaccggtgagctgcaagatgtagacaag
tccaagagcaaaaagccagcggaccgttcttcatgtggatcgaacactccctccagcagt
gaagtagaagctgatcctacagaaaagcatgcagaaggagaagaggaaaaacagacagag
gaacaagagaagcaggatgacatagatgctgcaatgaatccttttggtgatccatttaat
cgacgttgtagaagcacaattaatgtcagtgactcctggaaggaagtatcagatgagggc
cggctggcgtttcaaaaactcttctctagacaagtattgccccagagcttttcaccacct
catgcgaataaaggcaacatcaactgcctcagagaaaatgagaaagccgaaaagggactc
cagttagacctaaatagtacgacttggggttccttttcccagaagaaaggcgaggaagat
ggcgcatctgtgattggcgagaacaaggaaaaggaaggcctgtacactggactgggacag
tgtaaactatcagcgcgcagaactggattcaaaccttacaagaggtgttcagtggaggca
aaagagtgtggtgtgtcaggaaacggccatgatgaagagaaatgccccaagagattgcgc
gtggaaggagaggcttctacttga
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