Salvia splendens (scarlet sage): 121795313
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Entry
121795313 CDS
T07627
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121795313
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sspl01002
]
121795313
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121795313
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121795313
Peptidases and inhibitors [BR:
sspl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121795313
Ubiquitin system [BR:
sspl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121795313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
ubiquitin
Ubiquitin_2
GNAT_acetyltran
SASP
Motif
Other DBs
NCBI-GeneID:
121795313
NCBI-ProteinID:
XP_042049767
LinkDB
All DBs
Position
3:complement(17839637..17857337)
Genome browser
AA seq
1117 aa
AA seq
DB search
MTLLTTPPIDQAEGEQMLVPHADFAPEGPQPMEVASTEATTNAVDAQEIDEPPSARFTWK
IENFSKVNMKKQYSEVFHVGGFKWRILTFPKGNNVDHLSMYLDVADSSALPYGWSRYAQF
SLSVINQIHSKFTIRKDTQHQFNSRESDWGFTSFMPLSDLYDPGRGYLVNDTCIIEADVA
VRKVVDYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDNPSG
SIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
VVEGTIQQLFEGHHMNYLECINVEYKSTRKESFYDLQLDVKGCKDIYASFDKYVEVERLE
GDNKYHAEQYGLQDARKGVLFIDFPPVLQLQLKRFEYDFVRDTMVKINDRYEFPLQLDLD
RENRKYLSPEADSSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKED
MKRALEEQYGGEEELPQTNPGFNNSPFKFTKYSNAYMLVYIRESDTDKIICNVDEKDIAE
HLRIRLKKEQEEKEQKRQEKAEAHLYTIIKVAQDEDLVHQIGKDIYFDLVDHDKVRQFRI
QKQLTFNSFKEEVAKEFGIPVQFQRFWVWAKRQNHTYRPNRPLTPQEENQSVGQLREVSN
KANNAELKLFLEVAVGLDMQPLPPPEKTKEDIILFFKLYDPIKEELRYVGRLFVKGNGKP
MDILKKLNEMAGFAPDEEIELFEEIKYEPNVMCEHIDKKLSFRSSQLEDGDIICFQKSPQ
GLSSEECNYPTVSAFLIYVHNRQVVRFRSLEKPKEDEFCLELSKQNNYDEVVEYVARRLG
LDDASKIRLTSHNCYSQQPKPQPIKYRGAERLTDMLIHYNQISDILYYEVLDIPLPELQG
LKTLKVAFHHATKDEVVIHTIRLPKQSSVGDVINDLKSKVELSHPDAELRLLEVFYHKIY
KIFPLQEKIENINDQYWTLRAEEIPEEEKNLGPNYRLIHVYHFMKDTAQNQQIHNFGDPF
FLAINDNETLGEIKMRIQKKLHVPDEEFSKWKFAFLSLGRPEYLQDSDIMSSRFQRRDVY
GAWEQYLGLEHSDNTPKRSYAANQNRHTFEKPVRIYN
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgactctcctaacaactcccccaatcgaccaggcagaaggcgagcagatgcttgtgcca
catgctgattttgctccagaaggccctcaacctatggaagttgcttctactgaagcaaca
acaaatgctgtggatgcgcaagagatagatgaaccaccatctgcacgatttacttggaaa
attgagaatttctcaaaggtgaacatgaagaaacagtattctgaagtttttcatgttgga
ggtttcaaatggcgaattcttacattcccaaaagggaacaatgttgatcatctgtctatg
tatcttgatgttgcggactcttctgctttaccctatggttggagcagatatgcacaattt
agtctgtctgtgattaatcaaattcacagcaaattcacaataaggaaagatacacaacac
caattcaattccagagaaagtgattggggattcacctcattcatgccactcagtgacctt
tatgaccctggtcgtggttaccttgtgaatgatacgtgtataattgaggctgatgttgct
gttcgtaaagttgttgattactggtcccatgactcaaagaaagaaacaggttatgtaggg
ctgaagaatcagggtgctacttgctatatgaactcccttctccagacactgtatcatatt
ccttattttagaaaggctgtataccacatgccaacaacagaaaatgataacccatctgga
agcatccctctggcccttcagagcttgttctataagttgcagtacagtgatacaagtgtc
gcaaccaaggagttgacgaagtcttttggttgggatacatatgattcttttatgcagcat
gatgtacaagaattgaacagggttctctgtgaaaaacttgaagacaaaatgaaaggaact
gtagtggagggcacaatacagcagttatttgaggggcaccatatgaattacttagaatgt
attaatgtggagtacaaatcaacaagaaaggaatctttctatgatctgcagcttgatgtt
aaaggttgtaaagatatttatgcttcttttgacaaatatgtggaagtagaacgtcttgaa
ggtgataacaaatatcatgctgagcagtatggattgcaggatgctaggaaaggtgtcctt
ttcattgatttccctcctgttcttcagcttcagttaaaaagattcgaatacgattttgtt
cgtgatactatggtcaagataaatgatcgttatgagttccctttgcaacttgaccttgat
agagagaacagaaaatatttatctcctgaggcagatagcagtgtccgcaacctatacacc
cttcacagtgtcttggttcacagtgggggagtgcatggtggacactattatgcttatata
cggccaacactttctgatcagtggttcaaatttgatgatgagcgtgtgaccaaagaagac
atgaagcgtgccttagaagagcaatatggtggtgaagaagagctaccacagacgaatcct
ggatttaataactcaccattcaaattcaccaaatattcaaacgcttacatgcttgtttat
atacgtgaaagcgacacggataaaatcatttgcaatgtggatgagaaagacatagcagaa
catctaaggatacgtttgaagaaagagcaggaagaaaaagagcaaaagagacaggaaaag
gcggaggctcacctctacacaattattaaggttgctcaagatgaggatctagttcatcag
attggaaaggatatatattttgatcttgtggatcatgataaagttcggcaattccgtatt
cagaaacagctaacttttaattctttcaaggaagaagttgcgaaggagtttgggatacca
gtgcaatttcaacgtttctgggtatgggccaaacgccaaaatcatacataccgcccaaac
cgcccactcacacctcaagaggaaaatcaatctgtaggccagttaagagaagtatccaac
aaagcaaataatgccgagctaaaattatttctggaagtagcagtcggcctggatatgcaa
cctcttcctccacctgagaagactaaggaggatattattttgtttttcaaactttatgat
ccaatcaaagaggagctcagatatgttggaaggctgtttgtgaaaggaaatggaaagcca
atggatatattgaaaaagcttaatgaaatggctggctttgctcctgatgaagaaattgaa
ctctttgaggaaatcaagtacgaacctaatgtcatgtgcgagcacattgataagaagctc
agctttcgtagcagtcagctagaagatggtgacataatttgcttccaaaagtctcctcaa
ggtctgagcagtgaagaatgcaattatcctactgtctctgcttttctgatttatgtgcac
aatcgccaggtggttcgctttcgctcattggagaagcccaaggaagatgaattttgtctg
gaattgtcaaaacaaaacaattatgatgaagttgttgaatatgtggcccggcgtcttggc
ttagatgatgcatctaaaattaggcttacatcccataactgttattcacagcaaccaaag
ccacaaccgatcaaatatcgaggtgctgaacgacttacagacatgcttattcattataac
cagatttcagatatactatactatgaagtgctggatatccctttgcctgaactgcaaggc
ctaaaaactttgaaagttgctttccatcatgccactaaagatgaagttgttattcacact
atcagactaccaaaacagagtagtgtgggggacgtcattaatgatctcaagagtaaggtt
gagctgtctcatccagatgcagaactgagattgctggaggttttctatcataagatttat
aagatattcccgctccaagaaaagattgaaaatataaatgatcaatactggacgttgcgt
gctgaggagatacccgaggaggagaaaaaccttggtcctaattatcgcttgatccatgta
taccattttatgaaagatactgctcaaaatcagcagatccacaattttggagatcccttt
ttcttggccattaatgataacgagactttgggtgagattaaaatgcgcatacaaaaaaaa
ttgcatgttcctgatgaggagttctccaagtggaagtttgcatttttatctttgggtcgg
cctgaatatcttcaagattcagacatcatgtccagtcgttttcagagaagagatgtttac
ggtgcttgggaacaataccttggactagagcactctgacaacactccaaagcggtcatat
gcagccaaccagaatcggcacacgtttgagaaacccgtcagaatctacaattag
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integrated database retrieval system
