Salvia splendens (scarlet sage): 121806008
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Entry
121806008 CDS
T07627
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121806008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121806008
03051 Proteasome [BR:
sspl03051
]
121806008
Membrane trafficking [BR:
sspl04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
121806008
Proteasome [BR:
sspl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121806008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
Ubiquitin_2
Dsc3_N
Rad60-SLD_2
XPC-binding
RPN13_C
TBK1_ULD
HOIP-UBA
RAWUL
Motif
Other DBs
NCBI-GeneID:
121806008
NCBI-ProteinID:
XP_042062005
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Position
5:28224918..28229645
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AA seq
540 aa
AA seq
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MAADADSTAGVAAIQDVNVNIRCSNGSKFSVKTTLESTVAEFKDVLAHNCDVPAEQQRLI
YRGRILKDDQTLASYGLQVDHTIHMVHGSAPAAASSPVPVSTGAGNTNTTAATQGGGVNP
GGTGVADTGASLFPGLGLGGLGGTGGASGLFRAGLPEFEQVQQQLTQNPNMMRDIMNMPA
IQSLMNNPEIMRSLIMSNPQMREIIDRNPELAHILNDPSVLRQTLEAARNPELMREMMRN
TDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTIGGNAASDAGSNPFAALLGNQGGLQT
RDGAYSTSATETGTAVPNVNPLPNPWSNTGGSQTTNATRRNLTGDTRPPPITGLGGLGLP
DLERTGMSDPATFGQLLQNPAVSLMMQSLLSNPQHMEQLMGLNPQLRSMLDTNPQLREMM
QNPELIRQLTSSDMMQQMMALQQQLTRLRSTPDGDQTNQNRGTQNNMGLDMLMNMFGGLG
AGGFAVPNSPDGPPEEVYATQLSQLQEMGFFNTEENIRALRATSGNVHAAVERLLGSLGQ
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgatgcggactccactgccggggttgcggcgattcaggacgtgaacgtaaac
atccgatgctcaaacggctctaaattttcggtgaaaaccaccctcgaatcgacggtcgca
gaattcaaagatgttttggcgcacaattgcgatgttcctgctgaacaacagcggttgatc
tacaggggccggatcttgaaagatgaccaaaccctagccagttatggtttgcaggtagat
cacactattcacatggttcatggttctgcaccagctgctgcatcttctcctgttcccgtt
tctactggtgctgggaacaccaacactactgctgcaactcaaggtggtggtgtgaatccc
gggggcactggggtggctgatacgggtgcatccttgtttccagggcttggcttaggtgga
ctaggtggtactgggggggcatctggattatttagagctggacttccagaatttgaacag
gtgcagcaacaactaactcaaaatcctaacatgatgagggacataatgaacatgcctgcc
attcagagtttgatgaacaaccctgagattatgcgcagcctaattatgagtaaccctcaa
atgcgcgagataattgatcggaaccctgaacttgctcacatattgaatgatcctagtgtc
cttcgacaaacattggaagcagcaaggaaccctgagctaatgcgtgaaatgatgcgaaac
actgacagagcgatgagcaacattgaatcatctcctgagggattcaatatgctcaggcgc
atgtacgaaaatgtgcaagaacccttcctcaatgcaacaaccataggtggtaatgctgca
tctgatgctggatctaatccatttgccgctctcctcgggaaccaagggggcttacaaact
agagatggagcttattcaacaagtgcaactgaaacgggaacagctgttccaaatgtcaat
ccacttcccaatccatggagcaatactggaggttctcaaacaaccaatgctaccagacgt
aatctaactggagatacaaggccacctccaattactggactgggaggacttggtcttcct
gatttagagcgtacaggcatgagtgatcctgctacatttggtcagctgttgcaaaatccg
gctgtgtctctgatgatgcagagcttgctttccaaccctcaacacatggaacaactcatg
ggtctgaaccctcaactgcgaagcatgcttgacacgaaccctcaattaagagaaatgatg
caaaacccagaacttattcgacagttgacctcatctgatatgatgcagcaaatgatggct
ttgcagcaacaacttactcggctacggtcaaccccggatggagaccagactaatcaaaat
agaggaacacaaaataatatgggtttggacatgctgatgaatatgttcggtggactcgga
gctggtggctttgctgttcctaattcccctgatgggcccccagaagaagtgtatgcaact
cagctatcacaactacaagagatgggtttcttcaacaccgaagagaacatccgagcactc
cgtgccacttcaggaaatgtgcatgcagctgttgaacgacttctcggaagcctggggcaa
tag
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