Salvia splendens (scarlet sage): 121809984
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Entry
121809984 CDS
T07627
Name
(RefSeq) probable E3 ubiquitin ligase SUD1 isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121809984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121809984
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121809984
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
121809984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINGv
zf-RING_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
121809984
NCBI-ProteinID:
XP_042066786
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All DBs
Position
6:30788300..30793928
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AA seq
1056 aa
AA seq
DB search
MEIGPETAAEAERLLPLDSSASSIGSSQGENSSTAVGDNAKSRLDLLDDDDEGDVCRICR
NPGDVDNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPVYAENAPTRL
PFQEFIVGIAMKACHVLQFFVRLSFVLSVWLLIIPFITFWIWRLAFVRSIGEAQRLFLSH
LSTTVILTDCLHGFLLSASIVFIFLGATSLRDYFRHIRELGGQDADREDEGDRNGARAAR
RIPAQANRNIRVEGNGEDAGGAQVIAGAGQLIRRNAENVAARLEMQAARLEAQVEQMFDG
LDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIFVPFSLGRVIIYYLSW
ILSSATNPVLSTVVPLTESALSLANITLKTALTAVVNLTSDNQDHRILGQVADVLKSNGT
GQTITNNISSTVATEILKAQSVGASRLSDVTTLVVGYIFVFSVVIFYLGIVTLIRYSRGE
PLTMGRFYGIASIAETIPSLFRQFVAAMRHLMTMIKVAFVLVIELGVFPLMCGWWLDVCT
IRMFGKSISQRVEFFSVSPLASSLVHWVVGIVYMLQISIFVSLLRGVLRNGVLYFLRDPA
DPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMKTVPSIFPLDISVSD
PFTEIPADMLLFQICIPFAIEHFKLRHTLKSLLRYWFTAVGWALGLTDFLLPKPEDNGGH
ENGNADMGRQGRGHGEGVGQERVVALEDVNRPRYLAANANSAEELDDDLTDTDRWAFVLR
IVLLLVVAWMTLLIFNSALIIVPISLGRTLFNSLPFLPLTHGIRCNDIYAFVIGSYVIWT
GLAGARYCADLVRTKRTKVLLNQIWKWFGIIFKSSVLLSIWIFVIPVLIGLLFELLVIVP
MRVPVDESPVFLLYQDWALGLIFLKIWTRMVMLDHMMPLVDESWRLKFERVREDGFSRLQ
AFRVLREIVFPIIMKLLTALCVPYVLSRGVFPILGYPLVVNSAVYRYAWLGCLIFSALCF
CAKRFHVWFTNLHNSIRDDRYLIGRRLHNYGERERM
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgggccggagacggcggcggaagctgagaggctcttgcctttggactcctca
gcgtcttcgatcggttcttcgcagggagagaacagtagcacagccgtcggggataatgct
aagagcaggcttgatttgttagatgatgacgatgagggggatgtctgccggatctgcagg
aatcctggcgacgtggataatccgctgcgatacccctgcgcctgcagtggcagtatcaag
ttcgttcaccaggattgccttcttcagtggctgaatcatagcaacgctcgccaatgcgag
gtctgcaaacatccattttcattttctccagtttatgctgaaaatgcccccacgagactt
ccgtttcaggaattcattgttggaatagctatgaaagcctgccatgttctgcaattcttt
gtacggctcagtttcgtactttctgtttggcttctcatcattccattcatcacattttgg
atttggaggctggcatttgttagaagtattggagaagcccagagattattcttgagccac
ttatctacaacagtcattctaactgactgcttgcatggatttctgctgtctgctagcatt
gttttcatttttcttggagcaacttccttgagagattactttagacatatacgagagctt
ggtgggcaagatgcagacagagaagatgaaggagatagaaatggagcccgtgctgcaaga
aggattccagctcaagcaaatagaaacattcgtgttgaggggaatggtgaagatgctggt
ggagcccaagtaattgctggtgctggtcagttgattcgacgtaatgccgaaaatgttgca
gctaggttagagatgcaggcagctcggctagaggcccaggttgaacagatgtttgatggt
ttggatgatgctgatggggcagaagacgtaccttttgatgaactggttggcatgcagggg
cctgtgtttcatctggttgaaaatgcattcacagttcttgcaagtaatatgatattcctt
ggagttgtaatctttgtgccattctcattgggacgggttataatatattacctatcttgg
attttgtcatctgctaccaatccagtattatccacagttgttccacttactgaatcggca
ctttctttggctaatatcactctgaaaactgctcttactgctgttgtaaatctgacgtct
gataatcaagaccataggatacttggccaggtcgcagatgtactaaaatcaaatggaacg
ggacaaactatcacaaacaacataagctctacagttgcaactgaaatcttgaaagcacag
tcagttggggcatcacgtctctctgatgttaccacacttgttgttggctacatatttgta
ttttctgttgtcatcttctaccttgggatcgttaccttaattcggtactcaaggggagaa
cctttgacaatggggaggttctatggtattgcttccattgctgaaactattccatccctc
ttcaggcagtttgtggctgcaatgagacatttaatgactatgattaaagtcgcgtttgtt
ctggtaattgaacttggcgttttccctctgatgtgtggttggtggctggatgtttgtact
ataaggatgtttgggaagtcaatttctcagagagttgagttcttctcagtctcaccatta
gcaagctccttggttcattgggtcgtgggaattgtttacatgctgcaaataagtatcttt
gtcagccttcttcgaggggtcctgcgcaatggggttctttactttctacgagaccctgct
gatcctaattacaatccattccgcgatctcattgacgatcccgtacacaagcatgctcgt
agagttttgttgtctgttgctgtatatgggagtttgatagtcatgttggtatttttgcct
gttaaacttgcaatgaagactgttccttccattttccctctggatatctctgtatccgat
ccatttactgaaattccagctgacatgctcctatttcaaatatgcattccttttgctatc
gagcatttcaaactacgacatactctcaaatcccttctccggtattggttcactgctgtt
ggctgggctcttggcttaacagattttctactcccaaagccggaggataatggtggacat
gaaaatgggaatgctgatatgggcagacaagggagaggacacggagagggagtcggtcag
gagcgagtggtagcccttgaagatgtgaacaggcccagatatttggctgcaaatgccaat
tcggctgaggagcttgatgatgacctaactgacacggacaggtgggcttttgtacttcga
attgtgctattgttggttgttgcttggatgactctgcttatattcaactctgcgttgata
attgtaccaatatccctcgggagaacactcttcaattccctcccgtttctcccattgact
catggcatcaggtgcaatgatatttatgcttttgtcattggaagctatgtcatttggact
ggtttggctggagcaagatactgtgctgacctcgttagaacaaagagaactaaagtattg
cttaaccagatatggaaatggtttggcattattttcaagagttctgtgctgttgtcaata
tggatattcgtgattccagtgttaattgggctgctgtttgagctcctggtgattgtgcca
atgcgggttccagtggatgagagtccggttttccttctgtatcaagattgggctctcgga
ttgatatttttgaagatttggactagaatggttatgctagatcacatgatgcctctggtg
gacgagagctggcgactaaaatttgaaagggtgagggaagatggtttctcaaggctgcaa
gcctttcgggttctccgggagattgtgtttccgatcattatgaaactgctaactgcattg
tgtgttccatacgttctgtcgagaggggtgtttcctatattggggtacccactggttgtg
aactcggctgtgtaccgatatgcatggctgggatgtctgatcttcagtgcgttgtgtttc
tgtgcgaagcgcttccacgtttggttcaccaatctccacaactcgatacgagatgatcga
tacttgatcgggcgtaggctacataattatggagagagagagagaatgtag
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