Streptomyces spinosirectus: LXH13_36145
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Entry
LXH13_36145 CDS
T08958
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn00521
Streptomycin biosynthesis
sspn00523
Polyketide sugar unit biosynthesis
sspn00541
O-Antigen nucleotide sugar biosynthesis
sspn01100
Metabolic pathways
sspn01110
Biosynthesis of secondary metabolites
sspn01250
Biosynthesis of nucleotide sugars
Module
sspn_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LXH13_36145 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LXH13_36145 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LXH13_36145 (rfbC)
Enzymes [BR:
sspn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LXH13_36145 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UIR22138
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Position
complement(7887662..7888267)
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AA seq
201 aa
AA seq
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MRSLGIEGAWALEPKVFPDERGSFHEWYRGAEFREATGYDLSLKQANCSVSRWGVVRGVH
FADVPPGQAKYVTCIRGAILDVVVDLRVGSPTFAQWEAVRLDDDTRHALFIAEGLGHAFM
ALTDDATVVYLTSEGYAPEREHCVHALDPELGITWPEGIRPLLSPKDAEAPTLAEAQRDG
LLPSYADCTAYYEKLRGEVSG
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
ttgcgatcactggggatagagggcgcctgggccctcgaaccgaaggtcttcccggacgag
cggggcagcttccacgagtggtatcgcggggctgagttccgcgaggccaccgggtacgac
ctgtccctgaagcaggccaactgctcggtctcccgctggggcgtggtgcgcggcgtgcac
ttcgccgacgtgccgcccgggcaggccaagtacgtcacctgcatccggggcgcgatcctc
gacgtggtagtcgatctgcgcgtcggctcgcccacgttcgcgcagtgggaggcggtgcgc
ctcgacgacgacacccggcacgcgctgttcatcgccgaggggctcgggcacgccttcatg
gccctgaccgacgacgccaccgtggtgtatctgacgtcggagggctacgcgcccgagcgc
gagcactgtgtgcacgccctggacccggagctcggcatcacctggcccgagggcatccgc
ccgctgctgtctccgaaggacgccgaggccccgaccctggccgaggcgcagcgggacgga
ctgctgccgtcgtacgcggactgcaccgcctactacgagaagctgcgcggcgaggtcagc
ggctga
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