Streptococcus salivarius CCHSS3: SALIVB_1258
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Entry
SALIVB_1258 CDS
T01580
Symbol
rfbC
Name
(GenBank) putative dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-4-keto-6-deoxyglucose 3,5-epimerase) (dTDP-L-rhamnose synthetase)
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ssr
Streptococcus salivarius CCHSS3
Pathway
ssr00521
Streptomycin biosynthesis
ssr00523
Polyketide sugar unit biosynthesis
ssr00541
O-Antigen nucleotide sugar biosynthesis
ssr01100
Metabolic pathways
ssr01110
Biosynthesis of secondary metabolites
ssr01250
Biosynthesis of nucleotide sugars
Module
ssr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SALIVB_1258 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SALIVB_1258 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SALIVB_1258 (rfbC)
Enzymes [BR:
ssr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SALIVB_1258 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CCB93539
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Position
complement(1359560..1360153)
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AA seq
197 aa
AA seq
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MTEQFFGKELAARKIDAIPGLLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKL
QNNVSFSRKNVLRGLHAEPWDKYISVADEGKVLGTWVDLREGETFGNTYQTVIDASKGIF
VPRGVANGFQVLSDKVSYSYLVNDYWALELKPKYAFVNYADPSLDIKWENLEEAEVSEAD
KNHPLLKDVNPLKPEDL
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaattttttggtaaagaattagctgcacgcaagattgatgccatcccaggt
ctgcttgaatttgatattcctgttcatggagataaccgtggatggttcaaggaaaacttc
caaaaggaaaagatgttgccacttggttttccagaatcattctttgcagaaggaaaattg
caaaataacgtttctttctcacgtaaaaatgttttgcgtggcttgcacgccgagccttgg
gataaatacatctcagtggcagatgaaggaaaggttcttggaacttgggttgacctccgt
gaaggcgaaacgtttgggaatacttatcaaactgttattgatgcctcaaaaggaatcttt
gttcctcgtggtgttgccaatggtttccaagttctgtctgacaaagtatcatacagctat
ctcgtaaacgattactgggcacttgaacttaaacctaaatatgcctttgtcaactatgct
gacccaagccttgatatcaagtgggaaaacttggaagaagcagaagtctcagaagcagat
aaaaatcacccattgctcaaagacgttaaccccctcaaaccagaggatttgtaa
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