Solanum stenotomum: 125843597
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Entry
125843597 CDS
T08385
Name
(RefSeq) ubiquitin C-terminal hydrolase 13-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
sstn
Solanum stenotomum
Pathway
sstn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125843597
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sstn01002
]
125843597
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125843597
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125843597
Peptidases and inhibitors [BR:
sstn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125843597
Ubiquitin system [BR:
sstn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125843597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
ubiquitin
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
125843597
NCBI-ProteinID:
XP_049378690
LinkDB
All DBs
Position
11:2355679..2378908
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AA seq
1116 aa
AA seq
DB search
MTIMTPAPTDQEEEEMLVPRSDLVFEGPQPMEAQAETGNDVEKQPPEDPQTSRFTWKIEN
FSRLNVKKLYSDPFVVGGYKWRILIFPKGNNVDYLSMYLDVADSANLPYGWSRYAQFNLS
IVNQIHNKYSIRKETQHQFNARESDWGFTSFMPLGELYDPNKGYLVDDTCVVDAEVAVRK
IVDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSASIP
LALQSLFYKLQYSDNSIATKELTKSFGWDTYDSFLQHDVQELNRVLCEKLEEKMKGTVVE
GTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCADVYASFDKYVEVERLEGDN
KYHAEQYGLQDAKKGVLFMDFPPVLQLQLKRFEYDFSRDTMVKINDRYEFPLQLDLDREN
GKYLSPEADGSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKR
ALEEQYGGEEEQLPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKEKIMCNVDEKDIAEHV
RARLKREQEEKEQKKKEKAEAHLYTIIKVSRDEDLRQQIGKDIYFDLVDYDKVRSFRIQK
QTLFSIFKEEVAKEFGVPVQSQRFWLWAKRQNHTYRPNRPLTHLEEAQTVGQLREVSNKV
QNAELKLFLEVELGLDLRHITPPDKTKDDIMLFFKIYDPEKEELRYAGRLFVKGTSNPTE
ILNKLNEMAGYAPDQEIELYEEIKFEPIVLCEPIDKKFAFRTNQLEDGDIVCYQKSLSSE
SLQKLRYPDVPSFLEYVQNRQVVHFRSLEKLKEDDFCLELSKINTYDEVVERVAQRLGLD
DPSKIRLTPHNCYSQQPKPQPIKYRGVDTLGDMLVHYNQTSDILYYEVLDIPLPELQGLK
TLKVAFHHATKDEVVTYTIRLPKQSTVGDVINDLKTKVEFSKPDAELRLLEVFYHKIYKI
FPTSEKIENINDQYWTLRAEEIPEEEKNLGPNDRLIHVYHFTKETAQNQMQIQNFGEPFL
LVIYEGETLAQVKVRIQKKLQVPDEEFAKWKFAFLSLGRPEYLEDSDILSNRFQRKDVYG
AWEQYLGLEHPDNAPKRIHAAYQNRPTYEKPVKIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgaccataatgactcctgctcctaccgatcaggaagaggaggagatgcttgttccgcgt
tcagatttggtatttgaaggacctcagcctatggaagcacaagcagaaaccggcaatgat
gtggaaaagcagccaccagaggatcctcaaacttcaaggtttacttggaagatagaaaac
ttctctaggttgaatgtaaagaaactatactctgacccttttgttgtcggtggctataaa
tggcggattttaatttttcccaaggggaacaatgttgattacctgtccatgtatctggat
gttgctgattcagctaatttaccttacgggtggagtagatatgcccagttcaacttgtca
attgttaaccaaattcataacaagtactccatcagaaaagagacgcaacaccaattcaat
gcaagagaaagtgattggggtttcacatcctttatgccacttggtgaactatatgatcca
aataaaggttatcttgttgatgatacatgtgttgttgacgctgaggtagctgtccgaaaa
attgttgactattggtcgtatgactcaaaaaaagaaactggctttgttggactgaagaac
caaggagctacctgttatatgaactcacttctccaaactctgtaccatattccttacttc
aggaaggctgtataccacatgcctacaactgaaaatgatatgccctccgctagtatccct
ctagcgttgcaaagcttattctataagctccagtacagtgacaacagtatagcaacaaag
gagttgacaaaatcatttggatgggacacatatgattctttcttgcagcatgatgtgcaa
gaactcaatcgtgttctctgtgaaaagcttgaagaaaaaatgaagggtactgttgtggaa
ggcactatacagcagttatttgaagggcaccatatgaactatattgagtgcatcaatgtg
gactacaaatctacaagaaaggagtcattttatgatcttcagcttgatgtcaaaggctgt
gctgatgtttatgcttcttttgataaatatgttgaagttgaacgtctcgagggcgataac
aagtaccatgcggaacaatatggtttgcaggatgctaagaagggtgtcttatttatggat
ttcccccctgtcctgcagcttcagttaaagcgctttgaatatgatttttcgcgggacact
atggtgaagataaatgacaggtatgaattccctctgcaactcgatctagatagagagaat
ggtaaatacttgtcacctgaggcagatggaagtgtcagaaacctttacacacttcacagc
gtattagtccacagtggtggtgtgcatggtgggcactattatgctttcataaggccaact
ctttcagatcaatggtataaatttgacgatgaacgtgtgactaaagaagatgtgaaaaga
gctctagaagagcagtatggaggagaagaagagcagttgccacaaacaaatcctggattc
aataatactcccttcaaatttacaaagtactcaaatgcttacatgctggtctatattcgg
gaaagtgacaaagagaaaataatgtgtaatgttgatgagaaggacattgctgagcatgtc
agggcaaggttaaagagagaacaagaagagaaagagcagaagaagaaggagaaagcagag
gcacacctttacacaattataaaggtttctcgtgatgaagacctcagacagcagattggg
aaggacatatattttgatttagtggattatgacaaagttaggagttttcgcattcagaag
cagacactttttagcatttttaaggaggaggttgccaaagaatttggtgtaccggtgcaa
tctcaacgtttttggctatgggcaaagcgccagaatcatacatatcgtccaaatcggcca
ttaacacatctcgaagaagctcaaactgttgggcagttgagggaagtgtcaaataaggtt
caaaatgcagagctaaaattgttcttggaagtggagcttggactggacttgagacacatc
actccacctgacaagactaaagatgatattatgctattcttcaagatttatgatcctgag
aaagaagagctgaggtatgctggaagactctttgtgaagggaacgagtaatccaactgaa
atcttgaacaaactaaatgaaatggctggctatgcccctgatcaagagattgaactatat
gaggaaataaaatttgaaccgattgtcttgtgtgaacccatcgacaagaaatttgctttc
cgaacgaaccagcttgaggatggtgatatagtatgctatcagaaatccctttcttctgaa
agtctccagaagttacggtatccagatgttccttctttcctggagtatgttcaaaatcgc
caggttgttcacttccgatccttagaaaagttgaaggaggatgatttctgtttagagctg
tcaaagattaatacatatgatgaagttgtggaaagagtagctcagcgacttggcttggat
gatccatctaaaataaggctcacaccccataattgttactctcagcaacctaaaccccag
ccaattaagtacagaggtgtagacacccttggagatatgctggtccactacaatcagaca
tctgatattttgtactatgaagtactggacattcctttgccagaattgcaaggtttaaaa
accttaaaagtagcttttcatcatgctaccaaagatgaagtggtcacttacactatcaga
ctaccaaaacaatctactgttggtgatgtaattaatgatctaaagacaaaggttgagttt
tcaaagccagatgcagaattacgattgctagaggtcttctaccacaaaatttataaaata
tttccaacaagtgagaagatagagaacataaatgaccagtactggacattgcgggccgaa
gagattcctgaagaagagaaaaatctaggcccgaatgatcgtttgattcatgtgtatcac
ttcactaaagagactgcacaaaaccaaatgcaaattcagaattttggggaacctttcctc
ttggttatctatgagggtgagactttagctcaagtgaaggtgcgaatacagaagaaattg
caggtcccagatgaagagtttgctaagtggaaatttgcattcctctcacttggccgtcct
gagtaccttgaggactcagatatattgtccaaccgtttccagcgaaaggatgtttatggt
gcttgggagcagtatcttggcttggaacatcctgacaatgcccctaaaaggattcatgca
gcatatcagaatcgcccgacgtacgagaagcctgttaaaatttacaactaa
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