Solanum stenotomum: 125858905
Help
Entry
125858905 CDS
T08385
Name
(RefSeq) protein transport protein SEC23
KO
K14006
protein transport protein SEC23
Organism
sstn
Solanum stenotomum
Pathway
sstn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125858905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125858905
Membrane trafficking [BR:
sstn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125858905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
zinc_ribbon_10
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
125858905
NCBI-ProteinID:
XP_049394634
LinkDB
All DBs
Position
3:complement(65797292..65809670)
Genome browser
AA seq
779 aa
AA seq
DB search
MDFVELEAIEGLRWSWNSWPVSKSEASGLIIPLSIMCTPLMHFNELPVLPYDPLICTQCG
AVLNPYARVDYQSRIWVCPFCYRKNPFPKSYLGINENNIPAELFPTYSTVEYHLGKRGLA
QNPNSSSNFGNMSLSSKMPSFSSTSSSLDWAGYGIGPAFVFVVDACTSDEELGVVKNELL
HVIAQLPETALVGLVVFDSMVRVYDLGFGECCRVVMFHGERELSSEQTKQLLGIHRMKYQ
AGMVHMAPKQGFLIPLSEGEFSITSAIEDIHSSPQVMPGHRPLRATGVAVSVAVGLLEGC
LVSAGSRIMVFTSGPATIGPGMIVNSDFGNTIRNQRDIGNGYAPYYKKSSEFYKHISRRL
SDSSIALDLFACSLDQVGAAELRAPVESSGGFMMLTESFDSDQFRKCLCHIFSHDEVGNL
KMCLDATIEIVTTKDVKICGALGSCVSLQKKNGSVSDNEIGEGGTYMWKLGALTDKMCVA
FFFEVGDEQKAQPSSAFFIQFITNYRYGSMMGIRKRVITAARRWVGNHSPEIAAGFDQEA
AASVMARLAIHRAESNFSQDVVRWLDKRLIRFASKFGDYVPEDPSSFRLATNLSLFPQFI
YYLRRSQFIDVFNCTPDETAFFRLLLNREGVVRSLIMVQPTLFQYSFDGPPVPVLLDICS
VSPDVILLFDSYFYVVIHYGSKIAQWRKLGYDKDPSHDSFRKLLEAPEIDAEQLVSERIP
VPKLVKCDQHSSQARFLLAKLNPSVTHNSTYTQGSDIIFTEELSLQVFIEHLQALAVQG
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgtggaactggaggcaattgaaggtctccggtggtcatggaattcatggcca
gtatcaaaatccgaagcttcaggtctgataatcccactatctattatgtgtacaccattg
atgcattttaacgagctccctgtacttccttatgatcctcttatatgcacccaatgcggc
gccgttttaaacccatatgctcgtgttgattaccaatcgagaatttgggtttgcccgttt
tgttaccggaaaaacccgtttccaaaatcgtatcttggaatcaacgaaaacaatatacct
gctgaacttttcccgacgtacagtactgttgagtatcatttggggaaaaggggtttagct
caaaatccgaattcgagctctaattttggaaatatgtcactgtcatcgaaaatgccttcg
ttttcgagtacttcctcgagcttggattgggcgggatatgggattggcccagcgtttgtg
tttgttgtggatgcttgtacgtcggatgaggagcttggggtggtgaaaaatgagcttctt
catgtgattgctcaattgcctgaaactgcattagttgggttggtggtatttgattcaatg
gttagagtttacgatcttggttttggagagtgctgtagagttgtgatgttccacggtgag
cgtgagctttcttctgagcagaccaagcaactcctgggtattcatcgaatgaagtaccaa
gcaggaatggtacatatggctccaaaacagggattcctgataccactatcagaaggggag
ttcagcatcacatcagcaattgaagatatccattcttcaccgcaggttatgccagggcat
agacctttacgggctacaggagtagcagtatcagttgctgttggactactagaaggatgc
ttggtctctgcaggttcgcgtatcatggtcttcacctcagggccagcaacaatcggccca
gggatgattgtaaactctgattttggcaataccattaggaatcagcgagacattggtaat
ggttatgcaccatactacaagaagtccagtgaattctacaagcatatatctagaagattg
tctgattcgtccattgctcttgatctctttgcttgttcattggatcaagttggagcagct
gagcttagagctccagttgaaagttcaggggggttcatgatgttaacagagtcatttgac
tcggaccagttcagaaagtgtttgtgtcatatatttagccatgatgaggttggtaatttg
aaaatgtgtcttgatgcaactattgagatagtaacgacaaaggatgttaaaatttgtggg
gctcttggttcatgtgtttctcttcagaagaagaatggttcagtcagtgacaatgaaatt
ggcgagggaggtacctatatgtggaaattgggggcacttactgataaaatgtgtgttgcc
ttctttttcgaagtaggggatgaacagaaagcccaacctagttctgcatttttcatacag
ttcataacaaactatagatatggaagcatgatgggaattcggaagagggtgatcactgct
gcaagaaggtgggtcgggaaccactctccggaaattgctgctggttttgatcaggaagca
gcagcttcagtgatggctaggcttgccattcatagagcagagagcaatttttctcaagat
gttgtccggtggctagataaacgtttgatacgttttgcttcaaagtttggagattatgtc
ccggaagacccctcatcattccgtcttgcgactaatttatcccttttcccacagttcatt
tactatctaaggagatcccagtttattgatgtcttcaactgcaccccagacgaaactgct
tttttccgtctgttgttgaaccgtgagggggtagttcgctcacttattatggtccagcca
actcttttccagtattcattcgacggtccccctgtccctgttcttttagatatctgctcc
gtctctccggacgttatcttgctctttgactcctacttctatgtggttattcattatggc
tctaagatcgcacaatggcgtaaacttggctacgacaaggatcctagccacgacagtttc
cgcaaactgttagaagctcccgagatcgatgcagagcaactagtgtctgaaaggattcct
gtgccaaagcttgtaaaatgtgaccagcatagtagtcaggctagatttcttcttgccaag
ttgaatccatctgttacacacaactcaacttacacacaaggctcagatattatatttact
gaagaactaagcctacaagtttttattgagcacttgcaagctttagcagtgcagggttaa
DBGET
integrated database retrieval system