Solanum stenotomum: 125862186
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Entry
125862186 CDS
T08385
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125862186
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sstn02000
]
125862186
04147 Exosome [BR:
sstn04147
]
125862186
04090 CD molecules [BR:
sstn04090
]
125862186
Enzymes [BR:
sstn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125862186
Transporters [BR:
sstn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125862186
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125862186
CD molecules [BR:
sstn04090
]
Proteins
125862186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
ABC_ATPase
AAA_21
AAA_16
RsgA_GTPase
Zeta_toxin
AAA_15
AAA_30
AAA_25
DUF5906
DUF815
AAA_24
Motif
Other DBs
NCBI-GeneID:
125862186
NCBI-ProteinID:
XP_049398154
LinkDB
All DBs
Position
4:545617..551679
Genome browser
AA seq
1288 aa
AA seq
DB search
MMEEENDTQRGIDNMENKVIVSSDGSNCARVQDKTEKQKVAAAAAEVPYYKLLSFADTID
HALMIIGSIAAVGSGISFSMMAVLFGEIVDSFGMTVDNEKVVGEVSKVSLKFIYLALGSG
LATFAQVTCWTVTGERQAARIRCLYLKTVLRQDIGFFDQETNTGVIIERLSSDTLTIQDA
ICEKVGKFIQILATFLGGLVIAFIKGWRLALVLSSSIPPLVLSSAVLTILLTKLASRAQT
AYSEAATVVEQTISSIRTVASYTGERRAISEYYNSLNKAYYSGVQEGLVSGISMGVFFFV
FYSSYALAIWYGAKMILEHNYTGGDVMNVMMATLTGSFTLGQASPCLHSFAAGKAAAFKM
FQTINRKPVIDPYDMKGRKLVDISGDIELKNVHFCYPARPQESIFVGFSVSIPKGTTTAL
VGRSGSGKSTVISLIVRFYDPQAGEVLIDGINIKEFQLRWIRGKIGLVSQEPVLFGSTIK
DNIAYGKDDATLEEIKDAVRLANASKFIDKLPQGLDTRVGDHGSQLSGGQKQRIAIARAI
LKEPKILLLDEATSALDVESERIVQDTLDSVMINRTTVIVAHRLSTVKNADAIAVLQEGK
IIEKGSHLELMRKKEGAYVQLIQLQELSKYSGEKDSNELDNEEIIKNPNNQSNHQIFVTR
SASRHSSEVENSSHHPVSFSVTAAEKAVGECHDPNSTVMLRKDKDNTFYRLALMTRPELP
ELLLGCIAAVVNALILPIFGVLLSYVIKTFYEPAHELRKHSGFWSLLFLGLGLTSLLAKP
LRTFFFGVAGCKLIKRIRLMCFEQLVYMEISWFDRKENSIGAIGSRLSTDAASVRGMLGE
SLALLVENTSTAVAGLVIGLEASWQMTLIMIVMVPLIGLHGYLRLKYTNGGGADVKKLYD
DASRVAHEAVGGIRTVASFSAEEKVVQLYKRKCEGPVRAGIKEGLLSAAGFGFSMFCFYS
VYAASFYAGALLTESGKVTFAEVFRVFYGLSLTATAISQSGGLAPDSSKAKTGASSIFAL
LDRQSKIDSNNNSGMILDNVKGNIEFQHVSFNYPSRPEAPVLKDLCLSISSGETVALVGE
SGSGKSTVISLLQRFYDPDSGLITLDGLEIQKLNVKWLREQMGLVSQEPILFNDTIRANI
AYGKESDATEAEILAAAELANAHNFISGLQQGYETVVGERGIQLSGGQKQRVAIARAIVK
CPKILLLDEATSALDSESEKVVQDALDRVRSGRTTVVVAHRLSTIKGADVIVVIKDGVIV
EKGNHETLVNRQNGIYASLVSKSASTMK
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagaagagaatgatactcaacgaggcatcgataacatggaaaataaagttata
gtatcctcagatggctcgaattgtgcacgagtacaggacaagacagagaaacagaaagtg
gctgctgctgctgctgaagttccatactataagttgttatcttttgctgatacaatagat
catgcattgatgattattggttcgatcgcagctgttggtagtggaattagtttttcgatg
atggctgttttgtttggagagatagttgattcctttggaatgaccgtggataacgaaaaa
gttgttggtgaagtttctaaggttagccttaaattcatttatctggctctgggttcaggt
cttgctacatttgcacaggtgacttgctggacggtcacaggggaaaggcaggctgctaga
atcagatgtttatacctgaaaactgtcttaagacaagatattggatttttcgatcaggag
actaacactggtgtcattatcgaaagactgtctagtgatactcttactattcaagatgcc
atttgcgaaaaggttggaaaatttatccagatattagctacattccttggaggattagta
atagcttttattaaggggtggcgtctagcgttggtcttgtcatcttcgattcctccactt
gtcctatcttctgctgtcttgactatccttctgacgaaactagcatcgcgtgcacagact
gcttattcagaagctgcaactgtggttgaacagacaataagctcaattagaactgttgca
tcgtatactggggagagaagagctatttctgaatattacaattctctgaacaaagcttac
tattctggtgtacaagaaggtttggtttcagggatcagtatgggtgttttcttttttgtt
ttctattcaagttatgctttagcaatatggtatggtgcaaaaatgattttggaacacaac
tatactggaggagatgtgatgaatgtcatgatggctacactgaccggctcctttacttta
ggacaggcatctccatgcttgcattcgtttgctgctggaaaggctgcagcgtttaaaatg
tttcagacgataaacagaaagccggtcatagatccttatgatatgaaaggacggaaactt
gttgacattagtggtgacattgaacttaagaatgttcatttctgttatcctgcaagacca
caagagagcatatttgttggtttctctgtgtccatacctaagggaacaacgacagctcta
gtaggacgaagtggaagtggaaaatcgactgtgatcagtctaatagtgaggttctatgat
ccacaggctggtgaagttctgattgatggtataaatatcaaagaatttcagcttaggtgg
atcagggggaaaattggccttgttagccaagaacctgttctgtttggttcaacgataaag
gataatattgcctacgggaaggatgatgcaacacttgaagaaattaaagatgcagttcga
cttgccaatgcatccaaattcattgataaattacctcagggactagataccagagttggc
gatcacggaagtcagttatctggaggccaaaagcaaagaattgctattgcaagagctata
ctgaaggaacccaaaattctacttctggatgaagctacaagtgctcttgatgtagaatct
gagaggattgttcaagatacattggatagtgtcatgatcaaccgaactacagtaatcgtt
gcacatcgcttgagtacagtaaagaatgcagatgcaatagctgtacttcaggagggaaag
atcatcgaaaaaggttcccacttggaactaatgagaaaaaaggaaggagcatatgttcag
cttatacagttgcaagaacttagcaaatattcaggagagaaagattcaaatgaactggat
aatgaagagataatcaaaaatcctaacaaccaatcaaatcaccagattttcgtgacacga
tcagcaagtaggcactcatcggaagttgagaatagcagccatcatccggtatccttttca
gttactgcagcagagaaagcagttggtgaatgtcatgatcctaattcaacagttatgttg
aggaaggataaagacaacacgttttatcgcttggccttaatgaccagaccagagcttcca
gaattattacttggttgcatagctgcagtggtcaatgctctaatattaccaattttcggg
gtgcttctttcttatgttattaagactttctatgagccagctcatgaactcagaaagcat
tcaggattttggtcattgttatttcttggtctaggattgacatctttactagcaaaaccc
ttgaggacgttctttttcggtgtagcaggatgtaagttaatcaagagaattcgcctaatg
tgcttcgagcaattagtttacatggagattagttggttcgacagaaaggagaactcgatt
ggtgcaattggctcccgactatctacagatgcagcatctgtccgaggtatgcttggagag
tcacttgctttgcttgttgagaacacttcaacagctgtagctggtttagttattggactt
gaagcaagctggcaaatgacactcataatgatagttatggtgcctctaattggactacat
ggatatctgcgcttgaaatacactaatggtggtggcgctgatgttaagaaactatatgat
gatgcaagtcgagttgcgcatgaagcggttggaggtatcagaacagtggcttctttctct
gctgaagagaaggtggtgcaattgtacaaaagaaaatgtgaaggtccagttagagctgga
ataaaagaaggtctattgagtgctgcaggttttggtttttcaatgttctgcttttactct
gtgtatgctgccagtttttatgctggtgctctattgactgagtccggtaaggtcacattt
gctgaggtttttcgggttttctatggtcttagcttgacagctaccgcgatttctcaatca
ggtggccttgctcccgactcctccaaagccaaaactggtgcatcttcaatctttgcactt
cttgaccgacaatccaagatagactcgaacaataactcaggaatgatattggacaatgtg
aagggaaacattgagtttcaacatgtcagtttcaattatccaagtcgacctgaggctcca
gtcctaaaagatctatgcctatccattagctctggtgagacggttgctctggtgggagaa
agtgggagcggaaaatcaacagttatttccttgttgcaaagattttacgatcccgattca
ggcctaatcacattagatggactagaaattcaaaaactgaatgtgaaatggttgagagag
caaatgggactagtaagccaggagcctatattgttcaatgacacaataagagccaatata
gcatatggaaaagaaagtgatgccacagaagcagaaatattagctgctgctgagttagca
aatgctcacaacttcatcagtggcttacaacagggctatgaaacagtagttggtgaaagg
ggcatacaactatctggtggacagaaacaaagagttgcaattgcaagagctattgtgaaa
tgtccaaagatactactactagatgaggccacaagtgcgcttgactccgagtctgaaaaa
gtagttcaagatgcacttgatagagttagatcaggcagaacaacagttgtggtggctcat
agattgtccacaattaaaggagctgatgttattgttgttatcaaagatggagtgattgtg
gagaaaggaaatcatgaaactttggttaatagacaaaatggtatttatgcttctctagta
tcaaagtctgctagcactatgaagtag
DBGET
integrated database retrieval system
