Solanum stenotomum: 125862198
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Entry
125862198 CDS
T08385
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125862198
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sstn02000
]
125862198
04147 Exosome [BR:
sstn04147
]
125862198
04090 CD molecules [BR:
sstn04090
]
125862198
Enzymes [BR:
sstn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125862198
Transporters [BR:
sstn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125862198
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125862198
CD molecules [BR:
sstn04090
]
Proteins
125862198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
AAA_22
AAA_16
AAA_21
RsgA_GTPase
AAA_15
Zeta_toxin
AAA_30
AAA_25
DUF5906
DUF815
AAA_24
Motif
Other DBs
NCBI-GeneID:
125862198
NCBI-ProteinID:
XP_049398168
LinkDB
All DBs
Position
4:complement(568943..574927)
Genome browser
AA seq
1280 aa
AA seq
DB search
MEEENATGRGIDSMENEVLESSDGSNCARVSDKTEKQKVAAADKVPYYKLFSFADPVDHA
LMVIGMITAVGSGICFPLMAVLFGELVDSFGMTVDSEKIVDEVSKVAVKFVYLALGSGLA
TFIQVACWTVTGERQAARIRCLYLKTVLRQDIGFFDQETNTGVIIESLSSDTLTIQDAIG
EKVGKFIQVSATFLGGFVIAFIKGWRLALVLSSSIPPLVISSAVLVILLTKLASRAQTAY
SEAATVVEQTISSIRTVASYTGEKRAISEYQNSLNKAYHSGVQEGLASGLGFGVFMFVFY
ASYALAIWYGAKMILEHNYTGGDVMNVIMATLTGSFTLGYASPCLHAFAAGKTAAFKMFQ
MINRKPVIDPYDMNGQKLLDISGDIELKNIHFCYPARPQESIFDGFSVSIPKGTTTALVG
RSGSGKSTVISLIVRFYDPQAGEVLIDGINIKEFQLRWIRGKIGLVSQEPVLFGSTIKDN
IAYGKDDATLEEIKDAVQLANASKFIDKLPQGLDTRVGDHGNQLSGGQKQRIAIARAILK
DPKILLLDEATSALDAESERIVQETLDSVMINRTTVIVAHRLSTVKNADTIAVLQEGKIV
EKGCHLELMRNKEGAYVQLIQLQELSKYSGEQESNELDSEEIIINQQIPVTRSASRGSSR
IENSSHHSSSISVSAAEKAVGECHDPNSTVVLSKDKDNTICRLALMNKPEIPELLFGCIA
AMVNALILPIFGVLLSNVIKTFYEPAHELRKHSRFWSLLFLSLGLATLLATPLRTFFFAV
AGCKLIRRIRLMCFEKIVYMEVSWFDRKENSIGAIGSRLSTDAASVRGMVGESLALLVQN
TSTAIAGLVIGLEASWQLSLIMIVMVPLIGLNGYLHMKYVSGFGGDAKKLYEDASQVASE
AVGSIRTVASFSAEEKVVQLYKRKCEGPVRAGIKEGLVSAAGFGFSMFCLYSVYAASFYA
GARLMESGKVTFAEVFRVFYGLSLTATAISQSGGLAPDSTKAKTGASSIFALLDRQSKID
SSDNSGMTLENVMGNIEFRHISFNYPSRPEVQVLNDLCLAISSGETVALVGESGSGKSTV
ISLLQRFYDPDSGLITLDGIEIQKLKVKWLREQMGLVSQEPILFNDTIRANIAYGKESDA
TEAEILAAAELANAHNFISGLQQGYETVVGERGIQLSGGQKQRVAIARAIVKCPKILLLD
EATSALDAESEKVVQDALDRVRSGRTTVVVAHRLSTIKGADVIAVIKDGVIVEKGNHETL
VNRQDGIYASLVSKSASTMK
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagaatgcgactggacgaggcattgatagcatggaaaatgaagttttagaa
tcctcagatggctcgaattgtgcacgagtatcagataagacagagaaacagaaagtggct
gctgctgataaagttccatattataagctgttttcctttgctgaccctgtagatcatgca
ttgatggttattggtatgatcacagctgttggtagtggaatctgttttcccctgatggct
gtactgtttggagagttagttgattcctttggaatgaccgtggatagcgaaaaaattgtt
gatgaagtttctaaggtagccgttaaattcgtatatctggctctgggttcaggtcttgct
acatttatccaggtggcttgctggacagtcacgggggaaaggcaggctgctcgaatcaga
tgtttatacctgaaaactgtattaagacaagatattggatttttcgatcaggagactaac
actggtgttattatcgaaagcctgtctagtgatactcttactattcaagatgccattggc
gaaaaggttggaaaatttatccaggtatcagctacattccttggaggattcgtaatagct
tttattaaggggtggcgtctagcgttggtcttgtcatcttcaattcctccacttgtcata
tcttctgctgtcttggttatccttctgacgaaactagcatcccgtgcacagactgcttat
tcagaagctgcaactgttgttgaacagacaataagctctattagaactgttgcatcttat
actggagagaaaagagcaatttctgaatatcagaattctctgaacaaagcctaccattct
ggtgtacaagagggtttagcttcagggcttggtttcggtgtttttatgtttgtcttctac
gcaagttatgctttagcaatatggtatggtgcaaaaatgattttggaacacaactataca
ggaggagatgtgatgaatgtcattatggctacactgactggctcctttactttaggatac
gcatctccatgcttgcatgcgtttgctgctggaaagactgcagcttttaaaatgtttcag
atgataaatagaaagccggtcatagatccttatgatatgaatggacagaaacttcttgac
attagtggtgacattgaacttaagaatattcatttctgttatccagcaagaccacaagag
agcatatttgatggtttctctgtgtcgatacctaagggaacaacgacagctctagtaggg
cgaagtggaagtggaaaatcgactgtgatcagtctaatagtgaggttctatgatccacag
gctggtgaagttctaattgatggtataaatatcaaagaatttcagcttaggtggatcagg
ggaaaaattggccttgttagccaggaacctgtgctgtttggttcgacgataaaggataat
attgcctacgggaaggatgatgcaacacttgaagaaattaaagatgcagttcaacttgcc
aatgcatccaagttcattgataaattgcctcagggactagataccagagttggcgatcac
ggaaatcagttatccggtggccaaaagcaaagaattgctattgcaagagctatactgaag
gaccccaaaattctacttcttgatgaagctacaagtgctcttgatgcagaatctgagagg
attgttcaagagacattggatagtgtcatgatcaaccgaactacggttattgttgcacat
cgcttgagcacagtaaagaatgcagatacaatagctgtacttcaggagggaaagatcgtc
gaaaaaggttgccacttggaactaatgagaaataaggaaggagcatatgttcagcttata
caattgcaagagcttagcaaatattcaggagagcaagagtcaaatgaactggatagtgaa
gagataatcataaatcagcagattcctgtgacacgatcagcaagtaggggctcgtcgagg
attgagaatagcagccatcattcatcgtccatttcagttagtgcagcagagaaagcagtt
ggtgaatgtcatgatcctaattcaacagttgtattgagtaaggataaagacaacacgatt
tgtcgcttggccttaatgaacaaacccgagattccagaattattatttggttgcatagct
gcaatggtcaatgctctaatattacctattttcggggtacttctttctaatgttatcaag
actttctatgagccagctcatgaactcagaaagcattcaagattttggtcattgttattt
cttagtctaggattggcaactttactagcaacacccttgaggacgttctttttcgctgta
gcaggatgtaagttgatacggagaattcgcctaatgtgctttgagaagatagtttacatg
gaggttagttggtttgacagaaaggagaactcgattggggcaattggctctcgactatct
acagatgcagcatctgtccgaggtatggttggagagtcactcgctttgcttgtgcagaac
acatcaacggctatagctggtttagttattggacttgaagcaagctggcaattgtcactc
ataatgatagttatggttcctctaattggattaaatggatatcttcacatgaaatacgtt
agtggttttggcggtgatgctaagaaattatacgaggatgcaagtcaagttgcgagtgaa
gcagttggaagtatcagaacagtggcttctttctctgctgaagagaaggtggtgcaattg
tacaaaagaaaatgtgaaggtccagtgagagctggaataaaagaagggctagtgagtgct
gcaggttttggtttttcgatgttctgcttgtattctgtctatgctgccagtttttatgct
ggtgctcgattgatggagtccggtaaggtcacatttgctgaggtttttcgggttttctat
ggtcttagcttgacagctaccgcgatttctcaatcaggtggacttgctcctgattccacc
aaagccaaaactggtgcctcttcaatctttgcacttcttgaccggcaatccaagatagac
tcgagtgataactcaggaatgacattagagaatgtgatgggaaacattgagtttcgacat
atcagtttcaattatccaagtcgacctgaagttcaagtcctaaacgatctatgcctagcc
attagctccggtgagacggttgctctggtgggagaaagtgggagcggaaaatcaacagtt
atttccttgttgcaaagattttatgatcctgattcaggcctaatcacattagatggaata
gaaattcaaaagctgaaggtgaaatggttgagagagcaaatgggattagtaagccaggag
cctatattgttcaatgacacaataagagccaatatagcatatggaaaagaaagtgatgcc
acagaagcagaaatattagctgctgctgagttagcaaatgctcacaacttcatcagtggc
ttacagcagggctatgaaacagtagttggtgaaaggggcatacaactatcaggtggacag
aaacaaagagttgcaattgcaagagctatagtaaaatgtccaaagatactactactagat
gaggccacaagtgcgcttgacgcggagtctgagaaagtagttcaagatgcacttgataga
gtaagatcaggcagaacaacagttgtggtggctcatagattgtccacaattaaaggagct
gatgtgattgctgtaatcaaagatggagtcattgtggagaaaggaaatcatgaaactttg
gtcaatagacaagatggtatttatgcttctctagtatcaaagtctgctagcactatgaag
tag
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integrated database retrieval system
