Solanum stenotomum: 125866614
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Entry
125866614 CDS
T08385
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125866614
Spliceosome [BR:
sstn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125866614
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
125866614
NCBI-ProteinID:
XP_049402856
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All DBs
Position
1:18519850..18525405
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AA seq
360 aa
AA seq
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MADLNPFDLLGDDDNDDPSKLIAIHQQKVDPAKKASAPAAAAKKQPAKLPTKPPPPTQAV
REAKTEFGRGGGRGGGRGYSRGRGGGGFNREASNNENFSRNREFSGGIAAPEYMEGGRPS
ERRGGYGGPHAFRGGRQGGFGNEEMPEGDRSRRTFERRSGTGRGSEIKREGAGRGNWGTE
ADEVVTQLTGEVADEGEKNLNVEKPSTGEEAGDDKKENPVAEAEDKEPEDKEMTLEEYEK
LLEEKRKALQALKTEERKVDTKVFESMQQISKKPSDEIFVKLGSKDKRKESAEKEEKAKK
AVSINEFLKPAEGERYYAPGGRGRGRGRGSRGYSGANTMSNVEAAPPIEDPGHFPTLGGK
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttgaacccctttgatttgcttggtgatgatgataacgatgatccatcaaag
ctgattgctattcaccagcaaaaagttgatccggcgaagaaagcctcagctccggcggcg
gcggctaagaagcagccggcgaagctccccactaagcctcctcccccgactcaagctgtc
agggaagcaaaaacagaatttggacgtggtggaggtagaggtggtggacgtggctacagc
cgtggtcgtggtggaggtgggttcaatagggaagcatccaacaatgagaacttttctcgc
aacagagaattttcaggtggtatagctgcacccgaatacatggaaggaggaagaccctct
gaaagacgtggtggttatggtggaccccatgctttccgtggcggtagacaaggtggtttt
ggtaatgaagaaatgcccgagggggaccggtctcgtaggacatttgaacgccgtagtggt
actggccgcggaagtgagataaagcgtgaaggtgctggccgaggaaattggggaactgaa
gcagatgaagtagttactcagttgactggtgaagttgctgatgaaggtgagaaaaatctg
aatgtggagaaaccctccactggagaagaagcaggagacgacaagaaggaaaatccagtt
gctgaagctgaggacaaggagcctgaagataaggagatgacccttgaagagtatgagaag
ttgctagaagaaaaacggaaggctttgcaggcgcttaagactgaggaaaggaaggttgac
accaaagtatttgaatccatgcaacagatttcaaagaaacccagtgatgaaatctttgtc
aaattgggctccaaggataagagaaaagagtctgctgagaaggaagagaaggcaaagaag
gcggttagcattaatgagtttttgaagcctgctgagggtgagaggtattatgcacctggt
ggtcgaggtcgagggcgtggccgcggttctagaggttacagtggagccaacacaatgagc
aatgtggaagctgctcctcccattgaagatccaggtcacttccctacattgggtggcaag
tga
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