Solanum stenotomum: 125872473
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Entry
125872473 CDS
T08385
Name
(RefSeq) structure-specific endonuclease subunit slx1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125872473
DNA repair and recombination proteins [BR:
sstn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125872473
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Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
Motif
Other DBs
NCBI-GeneID:
125872473
NCBI-ProteinID:
XP_049409166
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Position
1:22765899..22772428
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AA seq
217 aa
AA seq
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MARPLSTIFKSTKPHILKPPKPSNFESLKPTNLKVPSSSNPIASSSSCSKSKKSRKSDAN
SQQSSGNDSELLTTPASNSTKFSNSKKKRSLWCVYLILSTNPPIKTYVGVTTSFSRRLKE
HNGELKGGAKASRSGRPWICACLIRGFKGRSEACAFESKWKQISGKLPRKRKSTTEEQEP
EDNGSLALLQHRHAALDRVQSLIDCSYLNIDWRSNFF
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggctagacctttgtcaacaatcttcaaatcgacgaaaccccatattctgaaaccacca
aaaccctcaaattttgaatcgttgaaacccactaatctcaaagttccctcttcttcaaat
ccaatagcatcttcttcaagttgcagcaaatcgaaaaaatcaagaaaatcggatgcaaat
tcacagcaatcatctggaaatgattcggaattactaacaaccccagcttcaaattcaacg
aaatttagtaattctaagaaaaagaggtctttgtggtgtgtataccttattctctcgaca
aatccacctataaagacctatgttggtgtcactaccagtttctctcgccgactaaaagaa
cataatggtgaattaaaagggggtgcaaaggcatctcgctcaggaagaccttggatttgt
gcatgccttattcggggatttaagggcagaagtgaagcttgtgcatttgaatcaaaatgg
aaacaaatttcgggaaagcttccccgtaaaaggaagagtactactgaggagcaggagcca
gaagacaatggatctcttgcattattgcagcatagacatgcagctctggatcgcgttcaa
agtttgattgattgcagttacttaaatattgattggcgttctaattttttctga
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