Solanum stenotomum: 125875187
Help
Entry
125875187 CDS
T08385
Name
(RefSeq) beta-galactosidase 17 isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00052
Galactose metabolism
sstn00511
Other glycan degradation
sstn00531
Glycosaminoglycan degradation
sstn00600
Sphingolipid metabolism
sstn00604
Glycosphingolipid biosynthesis - ganglio series
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
125875187
09103 Lipid metabolism
00600 Sphingolipid metabolism
125875187
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
125875187
00604 Glycosphingolipid biosynthesis - ganglio series
125875187
00511 Other glycan degradation
125875187
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125875187
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
125875187
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125875187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
125875187
NCBI-ProteinID:
XP_049412240
LinkDB
All DBs
Position
8:complement(10418754..10468044)
Genome browser
AA seq
714 aa
AA seq
DB search
MTTALKKNGISSSRAVGLRFRAAAMVKKRRVGTTIFMLLLALLAFGTFAPAFAPLPSLSS
SSSRSDIAGLNFMGDKNKFEIADDMFWKDGKPFQIIGGDLHYFRVLPEYWEDRLLRAKAL
GLNTIQTYVPWNLHEPREGQLVFKGIADIFSFLNLCQKLDLLVMLRVGPYICAEWDFGGF
PAWLLTIEPTVKLRSSDPAFINLVERWWGILLPKIVSYAYKNGGPIIMVQIENEFGSYGD
DKAYLHHLVRIARRHLGDDVILYTTDGGSRENLNKGTIPGDAVFSAVDFSTGDDPWPNFK
LQKEFNAPGKSPPLSTEFYTGWLTHWGEHIANTDATVTASYLERILSKNGSAVLYMAHGG
TNFGFYSGANTGADETDYKPDLTSYDYDAPIKESGDIDNPKYQALRRVIAKYTAAPLPSV
PSNTEKKAYGLIKLQKTKSLFNIVDTTYFDGVTESENPLAMESLGQMFGFMLYVSDYKAK
ANGSLLFIPKVHDRAQVFISCPSDNYEENPKYVGTVARWSNTSIRLPHTQCTSDSRIYIL
VENMGRINYGQYIFGKKGILSPVYLDGKPLQKWKMLPIPFHNLNEDQKNNSVISDAYTDL
RKSVLIKLKNKQNYHPAPAFYTGHLTVDEVKDTFLSFRGWSKGVAFINGFNLGRFWPSFG
PQCNLYVPAPILQEGKNLVVILELEAPNAELFVTSVDHPDFTCGSSANSRVHQI
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgactacagcactgaagaaaaacggcatttccagttcccgagcagtgggattgagattc
agagcggcggcaatggtgaaaaaacgacgcgtcggaacgacgatcttcatgctcctctta
gctctcttagcattcggaactttcgcacctgcctttgctccgcttccttctctctcgtct
tcttcttcccgttccgacatcgccggacttaattttatgggtgataagaacaaatttgag
attgcagatgatatgttctggaaagatggaaagccttttcagatcattggcggggacttg
cactattttcgggttcttccagagtactgggaagatcgactgctgagagcaaaggcattg
ggcttgaataccattcaaacatatgtcccatggaatttgcacgaaccaagggaaggtcaa
cttgtttttaaaggaatagcagatatcttttcattcctcaatctatgtcagaaattggat
ctcctggtgatgctccgagttgggccttatatttgtgcagagtgggattttgggggtttc
cctgcttggttacttacaattgaacctactgtaaaacttagatcatcagatcctgctttc
attaatttggttgaaagatggtggggaattttgctgccgaagatagtctcttatgcttac
aaaaatggcggccctattataatggttcagatagaaaatgaatttggttcatacggagat
gacaaagcctacctgcatcacttagtgaggatagcccgcaggcaccttggagatgatgtt
attctatatacaaccgatggaggttcaagagaaaatcttaacaaagggactattcctgga
gatgctgtcttttcagctgtcgatttttcaactggagatgatccatggcccaactttaag
ttgcagaaagagttcaatgcaccagggaaatcaccaccgctttcaacggagttctacact
ggttggctcacgcactggggagagcatattgcaaatactgatgcaactgttacagcatct
tacttagaaaggatcttgtcaaaaaatggatcagctgtgctctacatggcacatggtgga
acaaatttcgggttctacagtggtgcaaatactggtgcagatgagactgattacaagcct
gatcttacatcctatgattatgatgcacctatcaaagaatctggagatatagacaatcca
aaatatcaagctcttcgaagggtgattgctaaatatactgcagcacctcttccttcagtt
ccttccaatactgaaaagaaagcatatggacttattaagttgcagaagactaaatcgttg
tttaacatagttgataccacatactttgatggtgtcactgaatctgaaaacccacttgca
atggagtctttgggccagatgtttggcttcatgctttatgtttctgattacaaagcaaaa
gctaatggaagtttgttattcataccaaaggtgcatgacagggcacaagtattcatttca
tgcccttcagataactatgaagagaatccgaaatatgtaggcactgtagctagatggtca
aatacttcaatcaggcttcctcatactcaatgtacttcggatagcagaatttatatactg
gtggaaaatatggggcgtataaattatgggcaatacatttttggcaagaagggtatactc
tctcctgtttatttagatggtaaaccgttgcagaagtggaaaatgttgccgattcctttt
cacaacctaaatgaggatcaaaagaataattctgttatttcagatgcatacaccgacctt
agaaaatctgtgctgataaaactgaaaaacaaacaaaattatcatccagcgccagctttc
tacactggtcatcttacagttgatgaagtaaaagacacttttttgtcttttcgtggctgg
agtaaaggggttgcatttatcaatggatttaatttaggaaggttttggccgtcctttgga
ccccagtgcaacctttatgttcctgctccgatcctgcaagaaggaaaaaatctcgtggtt
attctcgaattagaggctccaaatgctgagttgtttgtgacctcagttgaccatccagat
ttcacatgtggttcttccgcaaattcacgagtgcatcaaatctga
DBGET
integrated database retrieval system
