Solanum stenotomum: 125876003
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Entry
125876003 CDS
T08385
Name
(RefSeq) cyclic nucleotide-gated ion channel 17-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sstn
Solanum stenotomum
Pathway
sstn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125876003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sstn04040
]
125876003
Ion channels [BR:
sstn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125876003
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
125876003
NCBI-ProteinID:
XP_049413055
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Position
9:complement(52693237..52701918)
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AA seq
720 aa
AA seq
DB search
MEPKKERFVRFYSGEKQQGGFLGGIADSSNVEKKFSPPLLNSDGKYKVTDTLKFGRPKKV
YPEDHESWRKRILDPGSDLVIQWNRIFIISCLLALFVDPLYFFLPIIQGTKESSCVKTDL
NLRIVVTIFRTIADFFYLLHVFIKFRTAYVAPNTRVFGKGELVMDPGEIARRYLKSDFFI
DLIATLPLPQIVIWFIIPATRSQHANHNNNALALIVLIQYIPRLYLIFPLSSQIIKATGV
VTKTAWAGAAYNLLLYMLASHVIGAAWYLLSVDRYTSCWKSICRKEDSSTQCVLRYLDCD
TFDLSSRKSWANITNVFESCDPDGDSTFKYGIFESAVKKDVVSSSFIAKYFYCLWWGLQQ
LSSYGQNLSTSTFIGETSFAILIAILGLVLFAHLIGNMQTYLQSLTLRVEEWRLKRRDTE
EWMEHRQLPEDLRKRVRRFDQYKWVATRGVDEETILHGLPTDLRRDIQRHLCLDLVRRVP
FFSQMDDQLLDAICERLVSSLSTEGTYIVREGDPVAEMLFIIRGRLESSTTNGGRTGFFN
CITLRPGDFCGEELLAWALLPKSTINLPSSTRTVKALVEVEAFALRAEDLKFVANQFRRL
HSKKLQHTFRFYSHHWRTWAACFIQAAWRRHKRRTMAKDLAALESFSLDESTVDEAEQHE
EHDQGNASSNPSPRISHLGVTILASRFAANTRRGAQKLKDVRLPKLQKPEEPDFSAEPDD
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaagaaggagaggtttgtaaggttctactctggtgaaaagcaacaaggtggt
tttttgggaggaatagcagacagttcgaacgtagagaaaaaattctcacctccattattg
aactctgatggcaaatataaagtcactgatactcttaagtttgggaggcctaagaaggtg
tatcccgaggaccatgagtcctggaggaagcgaatacttgatccggggagtgaccttgta
atccagtggaatagaatttttattatatcatgcttgctggcactgtttgttgatccattg
tatttctttttgcccatcatacaaggaactaaagagtcgagttgtgtgaaaacagatttg
aatttgcgaattgttgtcaccattttccgaactatagcagattttttctatctattacat
gtgttcattaagttccggactgcttatgttgccccaaatacaagggtatttgggaagggt
gagcttgtaatggatcctggagaaattgctagaagatatttaaaatctgactttttcatc
gatctgattgcaactcttcctctacctcagatagtcatctggttcattataccagcgacg
agaagccagcatgctaatcataacaataatgctcttgcgctgattgtcctaatccaatac
atccccagattgtatcttatatttccattaagttcacagattatcaaagctactggagtt
gtcacaaaaactgcttgggcaggggctgcatataatctacttctctacatgttggcaagt
catgttataggtgcagcatggtatttactgtcagttgatcgatatacttcttgctggaaa
tcaatatgccgaaaggaagacagctctacgcagtgcgtgcttcgctacttggattgtgat
acttttgacctaagttctcgtaagagttgggcaaatatcaccaatgtatttgaaagttgt
gatccagatggggatagtacttttaaatatggaatatttgaaagcgcagttaaaaaggat
gttgtctcctcaagttttatcgcaaagtacttctattgcttgtggtggggcttacaacag
ctgagttcttatgggcagaatttgtctacgagtacatttatcggggagacttcctttgct
atacttattgcaattttgggtctggttttgttcgcacatcttattgggaatatgcagaca
tacttgcagtctttgacgttgagggtcgaggaatggagactcaagagaagagatactgaa
gagtggatggagcatcgtcaacttccagaagatttgagaaagcgggttagacgttttgat
cagtataaatgggttgctactagaggagtagatgaagagacaattttacatggcctgcct
actgatcttcgtcgtgacatccaacgccatctttgcctggaccttgtccgaagggttcca
tttttctcccaaatggatgatcaattacttgatgcaatatgtgaacgtctagtctcgtcc
ttaagcacagaaggcacttatattgtccgtgaaggagatccagtcgcggaaatgttgttt
atcatcagaggtaggctcgagagttctacaacgaatggtggtcggactggtttcttcaat
tgcattacattgaggcctggagatttttgtggagaggagctacttgcttgggctttgctt
ccgaaatcaacgatcaacttgccttcttcgaccagaacagtcaaggcgcttgttgaagta
gaagcattcgcattgagagctgaagatctcaagtttgttgccaaccaatttagacgcctt
catagcaagaagctccagcatacattccggttctactctcaccattggcgcacatgggca
gcctgtttcattcaggctgcatggagacgacacaagcggagaacaatggcaaaagatctt
gccgcactggaatcattttctctggatgagagtacggtcgatgaagcagagcaacatgag
gagcatgatcaaggtaacgctagctcaaatccgtccccaagaatatcacacctcggagtc
acaatattggcttcaagatttgctgctaacacaagaagaggagctcaaaagcttaaagat
gtaagattgcctaagttacagaaacctgaagagcctgacttttcagctgagcctgatgac
tag
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