Shinella sumterensis: Q9314_07265
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Entry
Q9314_07265 CDS
T09417
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K13888
membrane fusion protein, macrolide-specific efflux system
Organism
ssum
Shinella sumterensis
Brite
KEGG Orthology (KO) [BR:
ssum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssum02000
]
Q9314_07265
Transporters [BR:
ssum02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Q9314_07265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
DUF4131
NAD_binding_7
Phage_GP20
DUF3138
Motif
Other DBs
NCBI-ProteinID:
WLS09563
UniProt:
A0AA50HH99
LinkDB
All DBs
Position
complement(1417719..1418999)
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AA seq
426 aa
AA seq
DB search
MSKSARPKEDARTAEDAGRTNVTFMPGAVPPRRRKRSRAWLWLGLAVLVAGAGYYGWRAY
TPADTAAAVVTEAVVRGDIENAVTAVGTLEAVKSVDAGAQVSGQLKALHVAIGDTVDKDT
LLAEIDPATIENRMEINRAELANLQAQLESKKAQLTLRQANIARQRNLVAGSAAAQQALD
QAVADLAAAEADVNATEAQIRKQQATIAGDDVDLGYTKIYAPMAGTVVSNPVKEGQTLNA
AQSAPTIVTIADLSTMTVRAEVSEADVGRLKVGMEAYFTLLGQPGKRFNGTLRQIEPTPT
VENNVVLYNALFDVPNPDGELMTSMSAQVFFVQAAARDVLIVPNGAVSMKRAEGGGKPQA
EVTVVKPNGATETRSVETGIRNRVSVEIKSGLEEGERVVVTPTSEGGSGRGGRGGQGRGM
RMPPMF
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagagcgcacgaccgaaagaggatgccaggaccgccgaggatgcgggccggacc
aatgtgacattcatgcccggcgcggtgccgccgcggcggcgcaaacgctcgcgggcatgg
ctgtggctggggcttgccgtccttgtcgccggggctggttactacggctggcgggcctac
acacccgccgacacggcagccgccgtcgtcaccgaggctgtggtgcgcggcgatatcgag
aacgccgtcaccgctgttggcacgctggaagcggtcaagtccgtcgatgccggcgcgcag
gtctcgggccagctgaaggcgctgcatgtcgccatcggcgacacggtcgacaaggatacg
ctgcttgccgagatcgaccccgcgaccatcgaaaaccgcatggagatcaatcgcgccgaa
ctcgccaatctccaggcccagcttgaatccaagaaggcgcagctcaccttgaggcaggcc
aatatcgcccgccagcgcaatctcgtggccggcagcgccgccgcccagcaagcgctcgac
caggccgtcgccgatctggcggccgccgaagccgatgtgaatgcgaccgaggcgcagatc
cgcaagcagcaggcgaccatcgccggcgacgacgtggacctcggctacaccaagatctat
gcgcccatggccggcaccgtcgtttccaacccggtgaaggaaggccagacgctgaacgcc
gctcagtcagcgcccaccatcgtcaccattgcggacctctcgaccatgacggtgcgcgcc
gaggtatccgaggccgatgtcggccgcctgaaggtcggcatggaggcttatttcacgctg
cttggccagcccggcaagcgtttcaacggcacgctgcgccagatcgagccgacgccgacc
gtggaaaacaacgtcgttctctacaacgcgttgttcgacgtaccgaaccccgacggcgag
ctgatgacctccatgagcgcgcaggtcttcttcgtgcaggccgccgcgcgcgacgtgctg
atcgtgccgaacggcgcggtgagcatgaagcgcgccgaaggcggcggcaagccgcaggca
gaagtgacggtcgtcaagcccaacggcgcaaccgagacccgttccgtcgaaaccggcatc
cgcaatcgcgtcagcgtcgagatcaagagtgggctggaagagggcgaacgcgtcgtcgtg
accccgacatcggaaggcggttcgggccgcggcggcaggggcgggcagggtcgcggcatg
cgcatgccgccgatgttctga
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