Sphingobium sp. SYK-6: SLG_06850
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Entry
SLG_06850 CDS
T01622
Symbol
ihfA
Name
(GenBank) integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
ssy
Sphingobium sp. SYK-6
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssy03032
]
SLG_06850 (ihfA)
03036 Chromosome and associated proteins [BR:
ssy03036
]
SLG_06850 (ihfA)
03400 DNA repair and recombination proteins [BR:
ssy03400
]
SLG_06850 (ihfA)
DNA replication proteins [BR:
ssy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SLG_06850 (ihfA)
Chromosome and associated proteins [BR:
ssy03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SLG_06850 (ihfA)
DNA repair and recombination proteins [BR:
ssy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SLG_06850 (ihfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
NA37
HU-DNA_bdg
Pox_polyA_pol
Motif
Other DBs
NCBI-ProteinID:
BAK65360
UniProt:
G2IMA5
LinkDB
All DBs
Position
712270..712566
Genome browser
AA seq
98 aa
AA seq
DB search
MSADETLTRAEIAEQLNRQIGLSRAESAQLVEQVLELVTEALEHGENVKISGFGTFVLRD
KNERIGRNPKTGIEVSITPRRVLTFRPSQSLRDRVAGA
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgatgaaaccttgacccgtgcggagatcgccgagcagctcaatcgccagatc
gggctgtcgcgcgcggagtcggcgcaattggtcgaacaggtgctggaactggtcaccgaa
gcgctggaacatggcgagaatgtgaagatttccggcttcgggacattcgtgctacgcgac
aagaatgagcggatcggccgcaatcccaagaccggcatcgaggtctcgatcacgccgcgc
cgggtgctgaccttccgtccgagccagtcgctgcgcgatcgtgtcgcgggcgcctga
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integrated database retrieval system
