Sphingobium sp. SYK-6: SLG_34180
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Entry
SLG_34180 CDS
T01622
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ssy
Sphingobium sp. SYK-6
Pathway
ssy00521
Streptomycin biosynthesis
ssy00523
Polyketide sugar unit biosynthesis
ssy00541
O-Antigen nucleotide sugar biosynthesis
ssy01100
Metabolic pathways
ssy01110
Biosynthesis of secondary metabolites
ssy01250
Biosynthesis of nucleotide sugars
Module
ssy_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SLG_34180 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SLG_34180 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SLG_34180 (rmlC)
Enzymes [BR:
ssy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SLG_34180 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BAK68093
NITE:
SLG_34180
UniProt:
G2IPB2
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Position
complement(3695647..3696192)
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AA seq
181 aa
AA seq
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MKVVETAIADVLIIEPKLFGDERGFFMESWNARTFREAGLDIDFVQDNHSRSSRGVLRGL
HYQQPGPQGKLVRVTAGAVFDVVVDMRRSSPTFGKWVGVELSARNKRMLWVPEGMAHGFL
CLEDGTDFLYKCRGFYDPANEHSLLWNDPAIGIAWPLDGIAPQLSAKDQAGAPLAEAVTF
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggtcgagactgcgatcgcggatgtgctcatcatcgagcccaagctgttcggt
gacgagcggggcttcttcatggaaagctggaacgcgcggacctttcgcgaggcggggctc
gacatcgatttcgtgcaggataatcacagccgctcctcgcgcggtgtgctgcggggcctg
cattatcagcagccgggcccgcaggggaagctggtgcgggtcacggccggggcggtgttc
gacgtggtggtggacatgcggcgcagctcgccgacgttcggcaaatgggtcggtgtggag
ttgagcgcacgcaacaagcgcatgctgtgggtgccggagggcatggcccatggcttcctc
tgcctcgaggacggcacggatttcctctacaagtgccggggcttctacgatccggccaat
gagcacagcctgttatggaacgatccggcgatcggcatcgcgtggccgctggacggcatc
gcgccacagctttccgctaaggatcaggcaggcgcgccgcttgccgaggcagtcacgttc
ccatga
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