Streptomyces tanashiensis: LDH80_04885
Help
Entry
LDH80_04885 CDS
T08718
Name
(GenBank) ricin-type beta-trefoil lectin domain protein
KO
K01201
glucosylceramidase [EC:
3.2.1.45
]
Organism
staa
Streptomyces tanashiensis
Pathway
staa00511
Other glycan degradation
staa00600
Sphingolipid metabolism
staa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
staa00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
LDH80_04885
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
LDH80_04885
Enzymes [BR:
staa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.45 glucosylceramidase
LDH80_04885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_30
Ricin_B_lectin
RicinB_lectin_2
Glyco_hydro_30C
Glyco_hydro_59
Glyco_hydr_30_2
Motif
Other DBs
NCBI-ProteinID:
UZX20092
LinkDB
All DBs
Position
complement(1087481..1089370)
Genome browser
AA seq
629 aa
AA seq
DB search
MFRSPHRTPLAGRLPGALLAGALATAGLTGLSAAPARAAGEQVDVWLTTTDDAGGRHVTR
GLQQQAPLTFQAGSGGSGTNITVDENTRYQTFTGGGASFTDTAAWLMKGSGALSQATRDA
TMKKLFSPTEGIGLSFVRNPMGGSDLARFGYTYDDLPAGRTDPALASFSLAHDLQDVLPL
TRQARQLNPRLTLVASPWTAPAWMKDSGQLNGGWLKAEHYGTYADYFVKYLQGWRDQGVP
VDYVTAQNEPTCCSGYPSMSWNGSGLAYFTKNELLPKLQNAGLPTKVLAHDWNWDTYDAY
AAPTVEDAAVRSHPNFGGVAWHGYGGDIAKQTEVHERHPQLDAFQTEHSGGTWIADQQRE
DMMNIIDYTRNWAKSVTKWSLAVDQNRGPHNGGCGTCDGLITVHNGDARHGQVDYTVEYY
TMGHLTKFVKPGAERIASTASTAVPNVAWRNPDGSKALIAYNGSANAQTMSVDWGGQRYT
YSLPGRTSATFTWAGTPSGGRDRTGVLRGLDGKCLDVAGGSSADGTPVQLWDCNGTAAQR
WTIRSDGSVQALGKCLDVSAGATSDGAKVQLYGCNGSGAQRWRYEEGSADLVDVPADKCL
DASGNASANGTRAQIWSCTGAANQKWRLG
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgttccgttcgccgcacaggacaccactcgccggccggcttccgggggcgctcctcgcg
ggcgctctcgccacggccggcctcacgggactctccgcagccccggcccgggccgccggc
gagcaggtcgacgtctggctcaccaccaccgacgacgccggtggccgtcacgtcacccga
ggcctccagcagcaggccccgctcaccttccaggccgggagcggtgggagcggcacgaac
atcaccgtcgacgagaacacccgctaccagaccttcaccggcggcggtgcctcgttcacc
gacaccgccgcctggctcatgaaaggctccggggcgctcagccaggcgacgcgggacgcg
accatgaagaagctcttctccccgacggagggcatcggcctgtccttcgtccgcaacccg
atgggcggctccgacctggcccgattcggctacacctacgacgacctgcccgccggccgg
accgaccccgcgctcgcttcgttctccctcgcgcacgacctccaggacgtcctgccgctg
acccgccaggcgcggcagctgaacccgcgtctcaccctcgtcgcctcgccgtggaccgcg
cccgcctggatgaaggacagcgggcagctgaacggcggctggctcaaggccgagcactac
ggaacgtacgccgactacttcgtgaagtacctccagggctggcgcgaccagggcgtcccc
gtcgactacgtcaccgcccagaacgagccgacctgttgctccgggtatccgtcgatgagc
tggaacggctcggggctcgcgtacttcaccaagaacgagctcctgcccaagctccagaac
gccggtctgcccaccaaggtcctcgcccacgactggaactgggacacctacgacgcgtac
gcggcccccaccgtggaggacgcggcggtccgcagtcacccgaacttcggcggggtcgcc
tggcacggctacggcggcgacatcgcgaagcagaccgaggtccacgagcgccatccgcag
ctcgacgccttccagaccgagcactccggtggtacctggatcgccgaccagcagcgcgag
gacatgatgaacatcatcgactacacccggaactgggcgaagtcggtgacgaagtggtcc
ctcgcggtcgaccagaaccggggcccgcacaacggcggttgcggcacctgcgacggtctg
atcaccgtccacaacggcgatgcccgccacggtcaggtcgactacaccgtcgagtactac
accatgggccacctcaccaagttcgtgaagcccggggccgagcggatcgcctccacggcc
tccacggccgtgccgaacgtggcctggcgcaaccccgacggctcgaaggcgctcatcgcg
tacaacggctccgcgaacgcgcagacgatgagcgtcgactggggtggacagcggtacacg
tactcgctgcccggcaggacatccgcgaccttcacctgggcgggcacgccgtccggcggg
cgggacaggaccggagtcctgcgcggtctcgacggcaagtgtctcgatgtggccggcggt
tcgagcgccgacggaacgccggtccagctgtgggactgcaacggcaccgccgcgcagcgc
tggacgatccgctcggacgggtccgtccaggccctcggcaagtgcctcgacgtgagcgcc
ggagcgacctccgacggggcgaaggtccagctgtacggctgcaacggctcgggtgcccag
cgctggcgctacgaggagggctcggccgacctggtcgacgtcccggccgacaagtgcctg
gacgccagcgggaacgcgtccgccaacgggacgcgggcgcagatctggtcctgcacgggc
gcggcgaaccagaagtggcggctggggtga
DBGET
integrated database retrieval system
