Streptomyces tanashiensis: LDH80_08040
Help
Entry
LDH80_08040 CDS
T08718
Symbol
ligD
Name
(GenBank) non-homologous end-joining DNA ligase
Organism
staa
Streptomyces tanashiensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
UZX20662
LinkDB
All DBs
Position
complement(1802575..1803603)
Genome browser
AA seq
342 aa
AA seq
DB search
MAGKAAAVELEVGDRTVRVSNPDKVYFPEPGYTKMDLVQYYLAVGDGVTRALRNRPTTLE
RYPDGVTGESFFQKRAPKYLPDWIPTAHITFPSGRSADEMCPTEPAAVLWAANLGAVTFH
PWPVRRDDTDHPDELRIDLDPQPGTDYADAVRAAHELRAVLDEHGLRGWPKTSGGRGLHV
FVPIVPEWTFTQVRRAAIACGRELERRMPDRVTIKWWKEERGERIFVDYNQTARDRTIAS
AYSVRPRPHAPVSAPLRWEEIDDAVPRDFDIRTMPARYAEAGDVHADMDDERFSLESLLE
LARRDEAEHGLGDLPYPPEYPKMPGEPKRVQPSRAKKEPEEG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcaaggcggcagcggtggaactggaagtcggcgaccggaccgtacgggtctcc
aaccccgacaaggtctacttccccgaacccggctacaccaagatggacctggtccagtac
tacctggccgtgggcgacggcgtcacgcgcgccctgcggaaccggcccaccaccctggag
cgctaccccgacggggtgaccggcgagtccttcttccagaagcgcgccccgaagtacctg
cccgactggatccccacggcccacatcaccttccccagcggccggtcggccgacgagatg
tgtcccaccgagccggcggccgtgctctgggcggccaacctcggcgcggtcaccttccac
ccctggccggtacgccgggacgacaccgatcatcccgacgaactgcgcatcgacctcgac
ccgcagcccggcacggactacgccgacgccgtccgcgccgcccacgagctgcgtgcggtc
ctcgacgagcacgggctgcgcggctggccgaagacctcgggcggccggggcctccatgtc
ttcgtgccgatcgtccccgagtggacgttcacgcaggtcaggcgggcggcgatcgcctgt
ggccgggagctggagcggcggatgccggaccgggtcacgatcaagtggtggaaggaggag
cgcggtgagcggatcttcgtcgactacaaccagacggcccgggaccgcacgatcgcctcc
gcctactccgtgcgcccccgcccgcacgcgcccgtctcggcgccgctgcggtgggaggag
atcgacgacgccgtgccgcgggacttcgacatcaggacgatgcccgcccggtacgcggag
gccggtgacgtccacgcggacatggacgacgagcggttcagcctggagtcgctgctcgaa
ctggcccggcgcgacgaggcggagcacggcctcggtgatcttccgtatccgccggagtat
ccgaagatgccgggcgagccgaagagggtgcagccgagccgggcgaagaaggagcccgaa
gaggggtag
DBGET
integrated database retrieval system
