Spongiibacter taiwanensis: NCG89_07300
Help
Entry
NCG89_07300 CDS
T08367
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
staw
Spongiibacter taiwanensis
Pathway
staw00521
Streptomycin biosynthesis
staw00523
Polyketide sugar unit biosynthesis
staw00541
O-Antigen nucleotide sugar biosynthesis
staw01100
Metabolic pathways
staw01110
Biosynthesis of secondary metabolites
staw01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NCG89_07300 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NCG89_07300 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NCG89_07300 (rfbC)
Enzymes [BR:
staw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NCG89_07300 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
USA44830
LinkDB
All DBs
Position
complement(1589139..1589696)
Genome browser
AA seq
185 aa
AA seq
DB search
MNVIPTSLSNCVVIEPNVHSDRRGLFLESYHAQRFSQEAGIDLPFVQHNFSVSVRGVLRG
LHFQRRQPQGKLVRVTRGEIFDVAVDIRQGSPSFAQWFGVTLSSASHRQLWVPPGFAHGF
LVLSDVAEVEYKCTAYYAPEDEASIAWDDPVLQIAWPLPSGVIPILSDKDAAAPGFEWFC
NEGVL
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgatccctacttcgttgagtaactgtgttgtgatcgagcccaacgtacacagc
gaccggcgcgggctgtttcttgagtcgtatcacgctcagcgtttctcccaggaggccggt
attgacctgccctttgtgcaacacaatttttctgtttcagttcgtggcgttttgcggggg
ctgcatttccagcgccgccagcctcagggaaagctggtgcgagttactcgtggcgaaata
tttgatgtggcggtcgatattcggcaggggtcgcctagctttgcgcaatggtttggcgta
acgctttcatcggcgagccatcgtcagctttgggtgccaccagggtttgcacacggattt
ttggtgctcagcgatgttgccgaggtggagtacaaatgcactgcctactacgcccctgaa
gatgaggcgagcatagcttgggatgatccagtgctgcagattgcttggcctttaccctcg
ggcgtgataccgatcctgtctgacaaagatgctgccgctcccgggtttgaatggttttgc
aacgagggggtattgtga
DBGET
integrated database retrieval system
