Sphingomonas taxi: MC45_16325
Help
Entry
MC45_16325 CDS
T03398
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
stax
Sphingomonas taxi
Pathway
stax03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
stax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MC45_16325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stax03400
]
MC45_16325
DNA repair and recombination proteins [BR:
stax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MC45_16325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ustilago_mating
Motif
Other DBs
NCBI-ProteinID:
AIT07676
UniProt:
A0A097EJD3
LinkDB
All DBs
Position
complement(3568675..3569550)
Genome browser
AA seq
291 aa
AA seq
DB search
MPARAYWQGQIRLALVSIPVEIYAATKSGASVAFKQIHEPTGQPIHYEKIVTGVGPVDTD
EIMKGYEVSKGEFVLLEQDEIDAVKLESKKTLELTQFVDASEIDVLYYEKPYFVVPADDL
AEEAFIVLREALRRTKKVGLGQLAMRGREYVVSLKPCGRGLVLETLRYADEVNKAQSYFR
EIPEGKPDAELLDLAEALIDKKTSAFDPQEFHDRYVDALKDLVERKRKAKGAKVIEEKDD
GGKTSSNVVDLMAALKKSMEKSGAAKAETKAETGAPAKKAPAKKAPAKKRA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacgcgcctattggcaaggacagatccggctcgctttggtgtcgatcccggtc
gagatctatgccgccaccaagagcggcgcgtcggtcgcgttcaagcagatccacgagccg
accggccagccgatccattacgagaagatcgtcaccggcgtcggcccggtcgacaccgac
gagatcatgaagggctatgaggtgtcgaagggcgagttcgtgctgctcgagcaggacgag
atcgacgcggtgaagctcgaatcgaagaagacgctggagctgacccagttcgtcgatgcg
agcgagatcgacgtgctctattacgagaaaccctatttcgtcgtgccggcggacgatctc
gccgaagaggcgttcatcgtgctgcgcgaggcgctgcggcggaccaagaaagtgggcctg
gggcagttggcgatgcgcgggcgcgaatatgtcgtcagcctgaaaccctgcggtcgcggg
ctggtgctcgagacgctgcgctatgccgacgaggtcaacaaggcgcagagctatttccgc
gagatccccgagggcaagcccgacgccgaattgctcgacctcgccgaggcgctgatcgac
aagaagacctcggcgttcgatccgcaggaattccacgaccgctatgtcgatgcgctgaag
gacctcgtcgagcgcaagcgcaaggcgaagggcgccaaggtgatcgaggagaaggacgac
ggcggcaagacgtcgagcaacgtcgtcgacctgatggcggcgctcaagaagtcgatggag
aaatcgggcgcggccaaggcggagaccaaggcggagacgggggcgcccgcgaagaaggca
ccggccaagaaggcgccggcgaagaaacgtgcctga
DBGET
integrated database retrieval system