Stella sp. ATCC 35155: STAQ_03620
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Entry
STAQ_03620 CDS
T07954
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
stel
Stella sp. ATCC 35155
Pathway
stel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STAQ_03620 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stel03019
]
STAQ_03620 (pnp)
03016 Transfer RNA biogenesis [BR:
stel03016
]
STAQ_03620 (pnp)
Enzymes [BR:
stel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
STAQ_03620 (pnp)
Messenger RNA biogenesis [BR:
stel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
STAQ_03620 (pnp)
Transfer RNA biogenesis [BR:
stel03016
]
Prokaryotic type
tRNA degradation factors
STAQ_03620 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
Motif
Other DBs
NCBI-ProteinID:
BBK35284
LinkDB
All DBs
Position
387784..389895
Genome browser
AA seq
703 aa
AA seq
DB search
MFDIQRVEMTWGGRKLVLETGKVARQADGAVMATYGETTVLCTVVGVKQPRPGADFFPLT
VNYQEKTFAAGKIPGGFFKREGRPTEKETLVSRLIDRPIRPLFAKGFLNEVQVVCTVLSH
DLENDPDIVALVGASAALTLSGVPFLGPVGAARVGYVDGQYVLNPLMDQLASSKLDLVVA
GTVEGVLMVESEAQELSEEVMLGAVTFGHQSFQPVIDAIIQLAERAAKDPWPMPEKSPTV
AAVAEKLGAFAGDFRGAYMEPQKQVRHEKVASAKEKALASLSDDERAIGQGLFKSMEADV
VRGAILDTGVRIDGRDVRTVRPIVSEVGVLKRAHGSALFTRGETQALVVTTLGTGQDEQV
IDALAGEYREHFMLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAVRPLLPKKDAFPYT
IRVVSEITESNGSSSMATVCGSSLSMMDAGVPLARPVAGIAMGLIKEGERYAVLSDILGD
EDHLGDMDFKVAGTETGVTALQMDIKITSITEEIMKVALGQARDGRMHILAEMEKALTTA
REGVSGNAPRITTITIPKEKIREVIGSGGKVIREICEVTGAKIDIEDDGTIKVAAVDAEA
SQKAIDWIRGIVAEPELGVIYTGKVVKTVDFGAFVNFLGSRDGLVHISELASSRVGKVTD
VVNVGDPVKVKVLGIDERGKVRLSMKVVDQATGADLQAAESGE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacattcagcgcgtggagatgacgtggggcgggcgcaagctcgtgctcgagacg
ggcaaggtcgcccgtcaggccgatggcgccgtgatggcgacctacggcgagacgacggtg
ctgtgcacggtcgtcggcgtgaagcagccccggccgggggccgacttcttcccgctcacg
gtcaactaccaggagaagacgttcgcggccggcaagatcccgggcggcttcttcaagcgc
gaaggccgcccgaccgagaaggagaccctggtctcccgcctcatcgaccggccgatccgg
cccctcttcgcgaagggctttctcaacgaggtgcaggtcgtctgcaccgttctctcccat
gacctcgagaacgatccggacatcgtcgccctggtcggggcctcggcggccctgaccctg
tcgggcgtgccgttcctcggcccggtcggggcggcccgcgtcggctatgtcgacggccag
tacgtcctcaacccgctgatggaccagctcgcctcctcgaagctcgacctcgtcgtcgcc
ggcaccgtcgaaggcgtcctgatggtcgagtccgaggcccaggagctttccgaagaggtc
atgctcggcgccgtcaccttcgggcaccagtcgttccagccggtgatcgacgcgatcatc
cagctcgccgagcgggccgccaaggatccttggccgatgccggagaagtcgccgacggtc
gcggcggtggccgagaagctcggcgcgttcgccggcgatttccgcggtgcctacatggag
ccgcagaagcaggtccgtcatgagaaggtggcatcggcgaaggaaaaggcgctggcctcc
ctctccgacgacgagcgcgcgatcgggcagggcctcttcaagtcgatggaggcggacgtg
gtgcgcggcgccatcctcgacaccggtgtccgcatcgacggccgcgacgtgcgcacggtg
cgccccatcgtctccgaggtcggcgtgctgaagcgtgcgcatggcagcgcgctcttcacc
cgcggcgagacccaggcgctggtcgtgacgacgctcggcacgggccaggacgagcaggtg
atcgacgcgctggcgggcgagtaccgcgagcacttcatgctgcactacaacttcccgccc
tactcggtgggcgaggctggccgcatgggcagcccgggccgccgcgagatcggccacggc
aagctcgcctggcgcgccgtccgcccgctgctgcccaagaaggacgccttcccctacacg
atccgggtcgtctccgagatcacggagtccaacggctcctcctcgatggcgaccgtctgc
ggctcgtcgctgtcgatgatggacgccggcgtgccgctggcgcgcccggtcgccggcatc
gccatgggcctcatcaaggagggcgagcgctacgccgtgctgtccgacatcctcggcgac
gaggatcacctcggcgacatggacttcaaggtggccggcaccgagacgggcgtcaccgcg
ctgcagatggacatcaagatcacctcgatcaccgaggagatcatgaaggtggcgctgggg
caggcccgtgacggccggatgcacatcctggccgagatggagaaggcgctgacgacggcc
cgcgagggcgtcagcggcaacgccccgcgcatcaccacgatcaccatcccgaaggagaag
atccgcgaggtcatcggctcgggcggcaaggtgatccgcgagatctgcgaggtgaccggc
gccaagatcgacatcgaggacgacggcacgatcaaggtcgcggcggtcgatgccgaggcg
agccagaaggcgatcgactggatccgcggcatcgtcgccgaaccggaactcggcgtgatc
tacaccggcaaggtcgtgaagaccgtcgatttcggcgccttcgtgaacttcctcggctcg
cgcgacggcctcgtccacatcagcgagctggcgtcgagccgtgtcggcaaggtcaccgac
gtcgtcaatgtcggcgacccggtgaaggtcaaggtgctggggatcgacgagcgcggcaag
gtgcgcctgtcgatgaaggtcgtcgaccaggcgaccggcgccgacctgcaggcggccgag
tccggcgagtag
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integrated database retrieval system
