Stenotrophomonas sp. MYb57: CLM74_12360
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Entry
CLM74_12360 CDS
T05384
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
stem
Stenotrophomonas sp. MYb57
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Big_9
SprB
Cadherin_5
Cadherin_4
Motif
Other DBs
NCBI-ProteinID:
AVJ33500
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All DBs
Position
2695049..2700118
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AA seq
1689 aa
AA seq
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MHQSSAQRVQTPRARSHVFFSSFCSWLALVLLCAGSLWPQLAAAAPSTFCPTLSMSVANS
GSQTININGCHGGFGISAGTAATPHGSRTVGVQSGANLPLTYTHNGDSATSDTFVIQDDS
NGDITVTVTIAPASAITLAASPAVNLTVGVPFSTSLSASGGTGPYTYSLDTGSIPPGLSL
SGNTISGTPTQRGAYAFTIRATDSASASGVRAFSGSATNPTLTIAPSSPSAAQNLPYSVT
FTASGGVPGYTFAFENGALPPGLTLSGATLSGTPTTQGSYTFGIRVTDSSSGTGSYAEVE
TVTLQVIPPPTILVNPFTVPGATVGAGYSQTLSGSGGTAPYTFAITAGSLPAGLSLNTST
GALAGTPTAAGTFNFTVTATDANTFTGSRAYSLVVALPVIVIAPTTLPDGTVAAAYSQSV
SASGGIAPYTYAITAGALPTGLTLGGTGGITGTPTAGGTFNFTVTATSNSTGTGAPHTGS
RAYALVIAPPTITLPASTLANGTQGGAYSAMLNPASGGTGAYSYAVTAGALPPGIVLNAS
SGALTGTPTSVGTSNFAVTATDSSTGSGPYSSAPRGYTLQIINTPPVANPLSASVAYNSS
ANPITLNISGGVPSSVAVGTAPLHGSANASGTSITYQPTAGYAGPDSFTYTATNTAGTSS
PATVSVTVGNPTITVTAGGPMSAQVGASYSQTFTWNGGTAPYSGFTVTGLPAGLSVGGTT
ATSVTVSGTVSAAGSFSLFATATDSSTGTGPFTTGQGFTLTVGAPTLSMTPAPGNLPMNY
GTATTINFASSGGTAPYSYALAAGSLPVGVSFNSAGVLSGTPTVPGNYNIAVRAADSSTG
AGAPFALQQNYTIVVATPAIAIDPPSLPNGSAGVAYNAQLSSSGGLAPYSYSLLSGALPV
GMSFNSAGALTGVPRSDGNFSITVGSTDSNSQTANRAYTFTITPATVVLAPAPLAGGAVG
TAYSQSLSSSGGIAPYTYAIVSGALPPGIAFSSAGVFSGTPVTAGSYTVVVRSTDDAGYN
ATQSYTIVIANAVPVAVDDSATTPSQQAVTIPVAANDSSVITSVAVASAPAHGTATVSGM
SVVYTPSGTYFGADSFTYTATGPGGTSAPATVSITITALPVPAGQPRAAVTTVAGQPVTI
DTTVGATGGPFTGVTLVTQPATGTTTVTGTTITYTPLATASGTASIVYTLNNAYGASAPI
TATITINQVPVAISRRVSANAGVAAVVELTTDATGGPFTAATLVSLSPSTAGTATIAPSG
SGASAGYRLTFTPAATFAGTATATFTLSNAFATSVPAMIDFDVIGRPDPTLDAEVMGLLG
AQTASTRRFATAQIGNFQRRMEGLHGAGRGTRFENGLSFGVDRDRRCQDEVRRMPGGDCR
QVTALDESVLRDDVAVAPAAGDRGTRRGDGDNGALTLWTGGSINSGDRDGRSGSAGFDFQ
TSGISAGADTRVNQAFAFGGGIGYGRDTTDVGHNDTRSHGESYTLAAYGSYHPGQYFFVD
GLLGYQLLSFDSRRYVTANGAMVQGDRDGKQWFASLSVGGDYQRDRLSVSPYARLDLARA
TLNGYTERGDAIHALRYEDQDVDTTTASLGVHMDYRYPVRFGTLSPQLRLEYQHDFQDAS
PVTMGYADLPGGPFYRSEIDGLKRNRFVFGLGAVLQTERDLSLRIEYRGLFGSSEDTDHG
LQLNLEKKY
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagtcatcagcgcaacgcgtgcagacgccgcgtgcgcgttcacacgtcttcttt
tcttcgttctgctcctggctcgccctcgtgctgttgtgcgcaggcagcctgtggccgcag
ctggcggcagcagcaccatcgacgttctgcccgacgctgagcatgtcggtcgccaacagt
ggctcgcagaccatcaacatcaacggttgccacggcggcttcggcatctctgcgggcacc
gcggcgaccccgcacggcagccgcaccgtcggcgtgcagtcgggtgccaacctgccgctg
acgtacacccacaacggcgacagcgcgaccagcgataccttcgtcatccaggacgactcg
aacggtgacatcaccgtcaccgtcaccatcgctccggcatcagccatcaccctcgccgcc
tcgcctgcggtcaacctgacggttggcgtgcctttcagcaccagcctcagtgccagcggc
ggcaccggaccgtacacctacagcctggacaccggctccattccgccggggctgagcctg
agcggaaacaccatcagcggtacacccacccagcgcggcgcctacgccttcaccatccgc
gccaccgacagcgcctctgccagcggcgtgcgcgccttcagcggttcggccacgaacccg
acccttaccatcgcgccgtcgtctccgtctgccgcgcagaatcttccgtactcggtgacc
tttactgccagcggtggcgtgcccggctacacgttcgcgtttgaaaacggcgcgctgccg
cctggcttgaccctgagcggcgcgaccctgagcggcacgcccaccacccagggcagctac
accttcggcatccgcgtcaccgacagcagcagcggcaccggcagctacgccgaggtcgag
acggtgaccctgcaggtgattccgccgccgaccatcctggtcaacccgttcaccgtcccg
ggtgcaaccgttggcgcgggctacagccagaccctcagcggcagcggtggtaccgcgccc
tacaccttcgccatcaccgcaggctcgctgcccgccgggttgagcctcaacaccagtact
ggcgcactggccggcacgccgaccgcagccggcaccttcaacttcaccgtgactgcgacg
gacgccaatacgttcaccggttcacgcgcctattccctggtggtggcactgccggtgatc
gtgatcgcgccgacgacacttcccgacggcacggtcgcggcggcatacagccagtctgtc
agtgccagcggcggcattgcgccgtacacctatgcgatcacggcaggcgcgctgcccacc
ggcctgaccctcggcggcaccggcggcatcaccggcacaccgacggccggcggcaccttc
aacttcaccgtgaccgccaccagcaacagtactggcaccggcgcaccgcacaccggctcc
cgggcctatgcgctggtgatcgctccgccgaccatcactctgccggcaagcacgctggcc
aacggcacccagggtggggcctatagcgccatgctgaatccggcaagcggcggcacggga
gcgtacagctatgcagtgaccgccggagcgctgccaccgggcatcgtgctgaacgcttcc
tcgggcgcgctgacaggcacgcccacgtcagtgggcacctccaacttcgccgtgaccgcg
accgacagcagcaccggcagcgggccctacagttccgcgccgcgcggctatacgctgcag
atcatcaacaccccgcctgtcgccaatccgctgtcggcgagcgtggcctacaacagcagc
gccaatccgatcacgctgaacatctctggcggcgtgccgtcctcggtggccgtcggtacc
gcgccgcttcatggcagtgcgaacgccagcggcacctccattacctaccagcccaccgcg
ggttacgcgggcccggacagctttacctacaccgcaacaaacaccgccggcacctcgtcg
cccgccacggtcagtgtcactgtcggcaacccgaccatcaccgtgactgcgggtggcccg
atgagcgcgcaggtcggcgccagctacagccagacgttcacctggaatggcggcactgca
ccctatagcggcttcactgtcaccggcctgccagcaggcctcagcgttggtggcactacc
gccaccagcgtgaccgtaagcggcacggtgagcgcggcgggcagcttcagcctcttcgcc
actgccaccgacagcagcaccggcaccggtccgttcaccaccggccagggcttcacgctg
accgttggcgcgccgaccctgagcatgaccccggcgccgggcaacctgccgatgaactac
ggcacggccaccaccatcaactttgccagcagcggcggcaccgcgccgtacagctacgca
ctggcggccggctcgttgccggtgggtgtgagcttcaactcggccggtgtgctcagcggt
acgccgaccgtgccgggcaactacaacatcgccgtgcgtgccgcagattccagcaccggc
gcgggtgcgccgttcgcgctgcagcagaactacaccatcgtcgttgccacgcctgcaatc
gccatcgatccacccagcctgcccaacggcagcgcaggcgtggcctacaacgcacagttg
agctccagcggcggccttgcgccgtacagctactctctgctcagtggtgcgctgccggtc
ggcatgtccttcaattccgctggcgcgctgaccggcgtcccgcgctcggatggcaacttc
agcatcacggtgggctccaccgattccaacagccagaccgccaaccgcgcgtacaccttc
actattactccggcgactgtggtgctcgcaccggcccccctcgcaggcggcgcagtcggc
accgcctactcacaaagcctgagcagcagcggcggtattgcgccctatacctacgcgatc
gtctccggcgccctgccccccggcattgccttcagctcagcgggcgtgttcagtggcacg
ccggtcacggccggcagctacaccgtggtggtgcgctccaccgacgacgccggctacaac
gctacccagagctacaccatcgtcatcgccaatgcggtgccggtggctgtggacgacagc
gccaccacgccgtcgcagcaggcggtgaccattccggtcgccgccaacgacagcagcgtg
atcacctcggtcgctgtggccagcgcgccagcgcacggcactgccacggtcagcggcatg
agcgttgtctatacgccatccggcacctacttcggcgccgacagcttcacttacaccgcg
accggtccgggcggcacttcggcgccggcgaccgtgtcgatcacgatcaccgctctgccc
gtgcctgcgggccagccgcgcgcggccgtcaccaccgtggcggggcagccggtgaccatc
gacaccacggtcggagccaccggcggtccgttcaccggtgtgaccctggtgacgcagccg
gccaccggcaccacgaccgtgaccggtaccaccatcacttacaccccgctggccaccgca
tcgggcacggcaagcatcgtctacaccttgaacaacgcctacggtgcttcggctccgatc
accgccacgatcaccatcaaccaggtgccggtggcgatctcgcgccgggtcagtgcaaat
gcgggtgttgcggcggtagtcgagctgacgacggatgcaacgggcggcccgttcactgca
gccaccctggtgtcactgtcgccgtccactgccggcactgccaccatcgcaccgtccggc
agtggtgccagcgcgggctatcgcctcacgttcaccccggcggccaccttcgccggtacc
gccacggccaccttcaccctgagcaacgcgttcgcgacctcggtgccggcgatgatcgac
tttgatgtgatcggccgaccggacccgaccctggacgcggaggtgatgggcctgctgggc
gcgcagaccgcctccacccggcgcttcgccactgcgcagatcggcaatttccagcgccgc
atggaaggcctgcatggtgccggcagaggcacacgcttcgagaatggcctgagcttcggc
gtcgaccgcgatcgtcgctgccaggatgaggtacgacgcatgcccggtggcgattgccgc
caggtgaccgcgctggacgaatctgttctgagggacgacgttgctgtcgcgcccgccgct
ggggatcgcggcacacgtaggggtgatggagataacggtgcccttaccctgtggaccggc
ggctcgatcaacagcggtgatcgcgatggtcgctcgggcagcgcgggcttcgacttccag
accagcggcatcagcgccggtgccgatacccgggtgaaccaggcattcgccttcggcggt
ggtatcggctacggccgcgacacgaccgacgtcggtcacaacgacacccgcagccacggc
gaaagctacaccctggccgcgtacggcagctaccacccggggcagtacttcttcgttgat
ggcctgctgggttaccagttgctgtcattcgactcacgtcgctacgtgaccgccaatggc
gcgatggtgcaaggcgaccgcgatggcaagcagtggttcgcctcgctgtcggtcggcggc
gactaccagcgcgaccgcttgtcggtgagtccgtatgcgcggctggacctggcccgcgca
acattgaacggctataccgaacgcggcgacgcgatccacgccctgcgctacgaggaccag
gatgtggacaccaccaccgccagcctgggcgtgcacatggactatcgctacccggtccgc
ttcggcacgctctcgccacagctgcggctcgaataccagcacgatttccaggacgccagc
ccggtgacgatgggctacgccgatctgccgggcggcccgttctaccgcagcgaaatcgat
ggactcaagcgcaaccggttcgttttcggtctgggggcggtgctgcagactgaacgcgac
ctcagcctgcggatcgagtaccgcggcctgttcggcagcagcgaagacaccgaccatggt
ctgcagctgaacctggaaaagaagtactga
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