Stenotrophomonas sp. WZN-1: CCR98_00760
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Entry
CCR98_00760 CDS
T04963
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
KO
K20276
large repetitive protein
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CCR98_00760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Big_9
Cadherin_5
SprB
Motif
Other DBs
NCBI-ProteinID:
ARZ72779
UniProt:
A0A1Z2LEQ6
LinkDB
All DBs
Position
170148..175739
Genome browser
AA seq
1863 aa
AA seq
DB search
MWHAESMHRDAMRHGLGRGVSGRLGAFLLMCLLLVAPGLVHAACTTFTPTNASAGSPMAS
GGTITIDASTCQGAPGFGIGNVIGAAGHGTATTTNGAASEITYSNNGDGATTDTFTFDDG
TGSNNVSVTVHIQAATSPITISPPTVPGGTVGVPYASTSFSASGGTAPYTFTVPPGTLPS
GLTLVGGVLSGTPTMEGTFSFSITATDSAVTPLTRVASYSITIAAPTISVTNTPPAAVIN
TPYSFTLAASGGNGPYTYTLDGGTTLPTGLALASNGTISGTPTVLGNKNFTVRVTDSSTP
SPFFSAANLSINVQNVVPPVANPVSATVAYGSASNPITLSITGGIPASVAVGTQAAHGTA
IASGTSITYTPTAGYAGPDSFTYTATNAGGTSAPATVTLTVSPPTVTYTPTSPLAGTVGA
AYSQSLAGASGGATPYSYVLASGSLPPGLSLASNGSLAGTPTANGSFSFSVRATDSSTGT
GPFSATSGTLTLNIAAPALTYAPGNPTAATVGAAYSGSLASAGGGTGPYTYSIASGSLPV
GITLASNGTLAGTPTAGGTFNFTVTATDSSGGTGPFSATSPALALTVNAPTISIAPITLT
NPTVGSAYSQTVTASGGTSGYSYAVTAGALPPGLSLSSGGAITGTPTSGGSFNFTLTATD
SSAGTGPYTGSRAYTLIVNAPTLTLSPASGATFNATAGTALSGMGFTAANGTAPYSYAIT
SGALPPGVSLASSGGLSGTPTAAGSFNFSVTATDASSGTGAPFSVTGGYTMVVVAPTITL
APATLPAMSVGTAFNQTLVASGGQPAFSYAIVAGALPAGLLLNTASGVISGTPTQAGAYN
VTVRATDNGGFSGNQPYSGTVGGAVVVLPAASLSNATAGTAYSYTFSASGGTPGYNYVLQ
TGLLPTGVSLSSAGVLSGTPTQAGNFTFTVRATDSSTGTGAPFSASQSYALTVNAPTISL
TPSTLPAATGGTAYSQTITASGGTGSHTFSLSAGALPPGVGLTSGGILSGTPTTAGSYAF
TITATDSLGFTGSQAYSFTVNAPAITLTPATLPAATGSTAYNQTLTASGGNGGYTFSLST
GALPPGIGLSSAGVISGTPTTTGSYTFTVQATDGFGFSGSQAYTMAVNAPAIVFVQTTLP
GGQVATAYSQTLSAGGGSGSFTYSLSAGALPPGIALSSAGALSGTPTTAGSYSFTVTATD
TFGFTGSQAFTVGINQPVPVVVNDAASTPANAAVTVNVTANDTGPITSIAIAQAPTHGTA
VASGLDVVYTPATSFFGSDSFTYTATGPGGTSTAATVSITVTPLAVPVAAAHSATVLAGQ
SVTVQAEAGALNGPFTAVSITRAPSSGTAVVQGNGIVYSADADASGVVDFDYTLSNPFGA
SAPARISVNVNPRPVAPALTASAIAGTVVNVDLTTTARGGPFTAANVVSVSPAEAGTAIV
SASGTGYTLAFTAAATFGGAVRITYTLSNAFATSAPGTVDVMVKPRSDPSRDAEVLGVLD
AQVEGARRMAIGQIGNFQRRLESLRAGGGRSGFSNGITFSSASSQRRAQPTELLQKGIGA
SGEALSMIEEPALQGDAAPAATSADGVAFWTGGAVNFGTLKPGAGSNGIDFTTSGVSLGA
DRQLGPSLSLGAGIGYGHDASDIGRNGSRSTVDGYSIAGYASFHPEGGFYVDGLLGYQWL
SFDARRFITDNGNTAYGSRDGTQWFASFSTGFQHRLDNLLLIPYGRLDLARATLDGYRER
GDAVYALDYEKQTVNTSTATAGVLAQWAVKRDYGMWTPQLRAEFGHDMQGSSEAFMRYAD
LMSGPVYRATLGRQSRNHTLLGAGIGLQTLKGWSLRAEYQSQFDSSSRDNQGIQISVQKT
LPP
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atgtggcatgcggagtcgatgcatcgcgacgcgatgcgccatgggctcggccgtggtgtt
tccggccgtctgggagcgttcctgctgatgtgcctgctgctggtagcaccaggcctcgtt
cacgcagcgtgcaccacctttacaccgaccaacgccagcgcggggtcgccgatggcctcc
ggcgggacgatcaccatcgatgcaagcacctgccagggcgcgccaggattcggtatcggc
aatgtgatcggggccgccggccatggcacggccaccaccaccaatggggctgcgtctgag
atcacctacagcaacaacggcgacggcgcgacgaccgacaccttcaccttcgatgacggc
acgggctccaacaacgtcagcgtcaccgtgcacatccaggccgccacttcgccgatcacc
atttcgccgcctaccgttcccggtggaacggtgggcgtgccatacgccagcaccagcttc
agtgccagcggcggtaccgcgccctacacattcacggtcccgcccggcacgttgcccagc
ggcttgacgctggtgggcggtgtcctgtcgggcacgccgaccatggagggtacgttctcg
ttctcgatcaccgcgactgacagtgctgttacgccgctcacccgcgtcgccagctattcg
atcaccattgcggcaccgaccatcagcgtgaccaacacgccgcctgctgcggtcatcaat
acgccgtattcctttacccttgccgccagcggtggcaacgggccatacacctacacgctg
gatggaggcacgacgctgcccaccggcctggcgctggccagcaatggcacgatcagtggt
acgcccaccgtgctgggcaacaagaacttcaccgtgcgcgtcaccgacagcagcacgccc
tcgcccttcttctcggccgccaacctgtcgatcaacgtgcagaacgtggtgccgccggtc
gccaatccggtcagtgcgacggttgcctacggcagtgccagcaacccgatcaccttgagc
atcaccggtggcatcccggcatcggttgcggtcggtacgcaggccgcgcatggcactgca
atcgcctcgggaacgtcgatcacctatacccccacggccggctacgcggggccagacagc
ttcacctacaccgccaccaatgccggtggtacgtcggcgccggcgaccgtgacgctcacc
gtctcgccgccaaccgtcacctacacccccaccagccctcttgcaggcaccgtcggcgcg
gcgtacagccagtcgctggccggcgccagcggcggcgccacgccatacagctatgtgctc
gcttccggcagcctgccgcccggcctcagccttgccagcaacggcagcctggcaggtacg
ccgaccgccaatggcagcttcagcttcagcgtacgcgccaccgacagcagcaccggcacc
ggaccgttcagcgccaccagcggcacgctgacactgaacatcgccgccccggcgctcacc
tatgcgccaggcaacccgactgctgcaacagtcggtgccgcgtacagcggctcgttggcc
agcgcaggcggaggcaccgggccctacacctattcgattgcctcgggcagtctgccggtc
ggcatcaccctggccagcaacggcaccctggcaggcacgccgaccgcaggcggtaccttc
aacttcacggtgaccgccaccgacagcagcggaggcaccggacccttcagtgcgaccagc
cctgcgctggcgctgacggtgaacgcgccgacgatctcgatcgcgccgatcacgctgacc
aacccgaccgtgggctcggcctattcgcagaccgtaaccgcatccggcggcaccagcggc
tacagttacgcggtgaccgccggtgcgctgccgcctggtctgagcctgtcgagcggtggt
gcgatcaccggcacgcccaccagcggtggcagcttcaacttcaccctgaccgccacggat
agcagtgcgggcaccgggccgtacaccggcagtcgtgcctatacgctcatcgtcaatgcg
ccaacgttgacgctgtcaccggcgtcgggtgccacgttcaatgcaacggcgggtactgcg
ctgagcggcatgggcttcaccgccgccaacggcacggcgccctacagctatgcgatcacc
tcgggtgccttgccgcccggcgtcagcctggcgtcgagcggtggcctgtcaggtacgccg
accgcagccggcagcttcaacttcagcgtgacggccaccgatgcgtccagcggtaccggt
gctccgttctccgtcaccggcggctacacaatggtggtggttgccccgaccatcacgctg
gcaccggcaaccctgccggcaatgtcagtgggaacggccttcaaccagaccctggttgcc
agcggaggccagccggccttcagctacgccatcgtcgcaggcgcgttgcccgcaggcctg
ttgttgaacacggccagcggggtgatcagtggtacacccacccaggctggcgcctacaac
gtcaccgtcagggcgaccgacaacggtgggttcagcggcaaccagccttactcgggtacc
gtcggtggcgcggtggtggtactgccggcggcgagcctgagcaatgccactgccggcact
gcctacagctacacgttctccgccagtggtggcacgcccggctacaactacgtgctgcag
accggtctactgcccacgggtgtctcgctgagcagcgccggcgtgctgtccggcacgcca
acccaggctggcaacttcaccttcaccgtgcgggcgactgacagtagtaccggtaccggc
gcaccgttcagcgcaagccagtcctatgcgctgaccgtgaacgcgccgacgatctcgctg
acgccgtcgacgctgccggccgcgaccggcggcacggcttactcgcagacgatcactgcc
agcgggggcaccggcagccataccttcagcctgtctgcgggcgcgttgccacccggtgtc
ggcctgaccagcggcggcatcctgtcgggcacaccgaccaccgcaggcagctacgccttc
acgatcacggccaccgacagccttggcttcaccggcagccaggcctacagcttcacggtc
aatgcgccggcgatcacgctcacgccggccacgctgcctgccgcaaccggcagcaccgcc
tacaaccagacactgacggccagcggcggcaacggcggctacaccttcagcctgagcacc
ggggcgctgccaccgggcatcgggttgagcagcgccggtgtgatcagtggcacgccgacc
accaccggcagctataccttcaccgtgcaggcgaccgatggcttcggcttcagcggcagt
caggcctacacgatggcggtgaatgcgccggcgatcgtcttcgtccagaccacgctgcct
ggcgggcaggtggcgaccgcctacagccagacgctgagcgccggcggcggaagtggcagc
ttcacctacagcctgagcgcaggcgcgttgccacccggcatcgcgttgagcagtgccggt
gcgctcagtggcacgcccacgacggcgggcagctacagcttcaccgtcaccgcgaccgat
accttcggcttcaccggaagccaggcattcacagtgggcatcaaccagccggtgccggtg
gtggtcaatgatgcggccagtacgccggccaatgcggcggtgaccgtcaacgtcaccgcc
aacgacaccgggccgatcaccagcatcgcgatcgcacaggcacccacgcatggcacggcg
gtggccagcgggttggacgtggtgtacaccccggccaccagcttcttcggcagcgacagc
ttcacctacaccgccaccggcccgggcggtacttcaacggcagccacggtgagcattacg
gtcaccccgctggcagtaccggtggccgccgcgcacagcgccacggtcctggccggacag
tcggtcaccgtgcaggctgaagccggggcgctcaatggtccattcaccgcggtcagcatc
acccgcgcgccctcctcgggtacggccgtggtgcagggcaacggtattgtctatagcgcc
gatgccgatgcctctggcgtggtcgatttcgactacacgctcagcaacccgttcggtgca
tcggcaccggcacggatcagcgtgaacgtcaatccgcgcccggtggcaccggcactgacc
gcctcggcgattgccggcaccgtggtcaacgtggacctgaccacgaccgcacgcggcgga
ccgttcaccgccgccaacgtggtttcggtctcgcctgccgaagcgggtaccgccatcgtc
tccgcaagcggcaccggctacacgctggccttcaccgcagcggcgacgttcgggggggcg
gtgcgcatcacctatacgctgagcaatgccttcgccacctcggcacccggcacggtggat
gtgatggtcaagccgcgtagcgatccttcgcgcgatgccgaagtgctgggcgtgctcgac
gcacaggtggaaggtgcgcggcgcatggcaatcggccagatcggcaacttccagcggcgc
ctggaaagcctgcgggccggcggcggtcgcagtggcttcagcaacggcattaccttcagt
tcggccagcagccagcgccgtgcgcagccgaccgaactgctgcagaagggcatcggcgcc
agcggcgaggcgctgtcgatgattgaggaaccggcgctgcagggtgatgccgcgcctgcg
gccacctcggccgacggcgtcgcgttctggaccggcggtgcggtgaacttcggcacgctg
aagcccggtgcaggcagcaacggcatcgacttcaccacctccggcgtcagcctgggtgcg
gaccgtcagctgggtccgtcgttgagcctgggtgcgggcatcggctatggccatgacgcg
tcggatatcggccgcaatggcagccgcagcacggtggatggctacagcatcgccggctat
gccagcttccatccggaaggtgggttctatgtggatggcctgcttggctatcagtggctg
agttttgatgcgcgccgcttcatcaccgacaacggcaataccgcctacggcagtcgcgac
ggcacgcagtggttcgcctcgttctccaccggcttccagcaccgcctggacaacctgctg
ctgataccttacgggcgcctggacctggcccgcgcaacgctggatggctatcgcgaacgc
ggtgatgcggtgtacgcgctcgactatgagaagcagacggtgaacaccagcaccgccacc
gcaggtgtgctggcgcaatgggcggtgaagcgcgactacggcatgtggacgccgcagctg
cgcgccgagttcggccatgacatgcagggctccagcgaggccttcatgcgctatgccgac
ctgatgtccggcccggtctatcgggccaccttgggccggcagtcgcgcaaccacacgctg
ctgggcgcgggtatcggcctgcagacgctgaagggctggtcgctgcgcgccgaataccag
agccagttcgacagcagcagccgcgacaaccagggcatccagatcagcgtgcagaaaacc
ctgccgccgtga
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