Stenotrophomonas sp. ASS1: MG068_02580
Help
Entry
MG068_02580 CDS
T06051
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
stes
Stenotrophomonas sp. ASS1
Pathway
stes00521
Streptomycin biosynthesis
stes00523
Polyketide sugar unit biosynthesis
stes00541
O-Antigen nucleotide sugar biosynthesis
stes01100
Metabolic pathways
stes01110
Biosynthesis of secondary metabolites
stes01250
Biosynthesis of nucleotide sugars
Module
stes_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
MG068_02580 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MG068_02580 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MG068_02580 (rfbC)
Enzymes [BR:
stes01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
MG068_02580 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QBL39464
LinkDB
All DBs
Position
560224..560781
Genome browser
AA seq
185 aa
AA seq
DB search
MKIVETSLAGCRVIEPAVFGDSRGFFFETWNAERFQDQGLPGSFVQSNVSSSVRGVLRGL
HYQWPRPQGKLVSVLEGEVYDVAVDIRRGSPTFGQWEAVVLSAENRKQFWIPEGFAHGFA
VLSERALFSYLCTDVYVKEVDAGIRWNDADIAVDWPVSAPTLSAKDENAPFLKDIAEDRL
PVYVP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatcgttgagacttcgctggcaggatgccgggtgatcgaaccggcagtgttcggc
gactcgcgcggattcttctttgagacctggaatgccgaacgcttccaggaccaaggcctg
ccgggcagtttcgtgcagagcaacgtatcctcgtccgtccgcggtgtgctgcgcggtttg
cactaccaatggccacgcccgcagggcaagctggtcagcgtgctggagggcgaggtctat
gacgtggccgtggacatccgtcgtggctcgccgaccttcggccagtgggaagcggtggtg
ctgagtgctgaaaacaggaagcagttctggattccggaaggcttcgcgcatgggtttgcc
gtgctgtccgaacgtgcgctgttcagctacctgtgcaccgatgtctacgtcaaggaggtg
gatgcgggtatccgctggaacgatgctgatatcgcggtggactggccggtcagcgcaccg
accttgtcggccaaggacgagaacgcgccgttcctgaaggacatcgctgaagatcgtctg
ccggtctacgtgccatga
DBGET
integrated database retrieval system