Stenotrophomonas sp. ASS1: MG068_17710
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Entry
MG068_17710 CDS
T06051
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
stes
Stenotrophomonas sp. ASS1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
FLgD_tudor
C3_CUB2
Motif
Other DBs
NCBI-ProteinID:
QBL42252
LinkDB
All DBs
Position
complement(3834892..3837921)
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AA seq
1009 aa
AA seq
DB search
MSRAVPRAFRPRRLAVSVLQALAVPSLLLTTASVAWAGCNNPAPTAGQTVTCDANAPNPQ
TVPVAASGAAGITVNVGNGAQLQQSGGGSALVLVGAGGHLLSNQGTISSVGGAAVQLGGG
SRVDSRGSISTGNNIALQFIGAGDSVLVNRGTISGQTGVQFDAGNDRLEMQAGSITGGVL
QGDGNDVLLLSDGTIDSVDQGGGDDQMTVTGGTVTGVVVQGSGRDDFVMSGGTIGALQQG
DNIDTFRMSGGRIVGAFEDGDQAWMTAGRIGRVNMKLDKNLWDQSGGIVEGNVVTGFDTD
TIIISGTAYIGGNISVSGGADSVTITDGTVRGQVLLSTGNDTFNWNGGGIVYGAIDMGPD
NDVANLSNLNQGNLGAVPLFDGGSGIDQLNFNNVKAAGVGRFQNWETISLANSTELTFDG
DLVLGDSGTGTGTLTVDDTSTVYAGSGGYAVRPFNSGTLVEMVNAGRIDLTGTGAGDVFT
VRGNYRGDGGGLYLRTVLGADNSASDRLVIDGGVATGTTGIGVINAGGSGAATLADGILV
VQALNGGRTAPGAFSLFAPVAAGAYEYFLFKGGVSAGTSENWYLRSTVVAGPAPAPNGSG
INGVPPPPTPPVAPPPPITPAPPPPPEGATDPDLTAGETAPPPPPPEPVPVAPPSDPAVP
DVPVAGGSLPGTGAPPTPGARPAEGAVVPLYRVETATYAVVPPLLRETSLASLGTFHERQ
GEQRLLYNQGAFRTAWGRLVGQSSEIQWKGDAKPGFDGDVMGLQAGLDVWATANDNHRNQ
IGVFVGRTRAQGKTTGLALGWENVHVGQNRLDDKHVGLYWTFTDSSGGYIDAVAMQSRYD
GRVRSSRGLGFGIKGDGTSVSVEAGKPLLHLGQSVWWLEPQVQVIWQRTALDDRRDEVSS
VRFDNDNAWTGRIGLRLAGDYQLADNGWQPYFKLNYWHGRSGEDRVSFDNDTIINSQRSR
ALEAGVGVVGRFNRTISAYAVADYTRELGGNRNEKRRIIEGNIGLRADW
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtgccgttccgcgtgcgttccgcccgcgccgccttgctgtttccgtgttgcag
gccctcgccgttccgtccctgcttctgacgaccgccagcgtcgcctgggcgggctgcaac
aacccggcaccgaccgccggccagaccgtcacctgtgatgccaacgcaccgaatccgcag
accgttcccgttgccgccagtggcgcggccggaatcaccgtcaacgtcggcaatggtgcc
cagttgcagcagagtggtggtggatcggccctcgtgctggtcggtgccggtggtcacctg
ctgtcaaaccagggcacgatcagttcggtgggcggtgcggccgtgcagcttgggggcggc
agccgcgtcgacagccgcggcagcatcagcaccggcaacaacattgccctgcagttcatc
ggcgcaggcgacagcgtgctggtcaatcggggaacgatcagtggtcagaccggcgtgcag
ttcgatgcgggcaacgatcgcctcgagatgcaggccggcagcatcaccggaggcgtactg
cagggcgatggaaacgatgtgctgctgctcagtgacggcacgatcgacagcgtcgaccag
ggcggtggcgatgaccagatgactgtcaccggcggcaccgtcaccggcgtggtggtgcag
ggcagtggccgcgatgatttcgtcatgagtggcggcacgatcggcgcgctgcagcagggc
gacaacatcgataccttccgcatgagcggtggccgcatcgtcggtgcgttcgaggatggc
gaccaggcctggatgaccgctggccgcatcggccgcgtcaacatgaagctggacaagaat
ctgtgggatcagtccggcggcatcgttgagggcaacgtggtcaccggcttcgacaccgac
accatcatcatctcgggtacggcctacatcggcggcaacatcagtgtcagtggtggtgcc
gacagcgtgaccatcaccgatggcaccgtgcgcggccaggtactgctcagcaccggcaac
gacactttcaactggaacggcggcggcatcgtctacggcgcgatcgacatggggccggac
aacgacgtggccaacctcagcaacctcaaccagggcaaccttggtgcagtgccgctgttc
gacggtggcagtggcatcgatcagctcaacttcaacaacgtcaaggctgcgggcgtggga
cgcttccagaactgggagacaatcagcctggccaacagcaccgagctgaccttcgatggt
gatctggtgctgggtgacagcggaaccggcaccggcacgctcacggtggatgacaccagc
actgtctacgcgggcagtggcggctatgccgtccgtccgttcaacagtggcacactggtg
gagatggtcaatgccgggcgcatcgacctgaccggtaccggcgctggcgacgtgttcacc
gtgcgtggcaactaccgcggtgacggtggcggcctgtacctgcgtaccgtgctgggtgcg
gacaattccgccagcgatcgactggtgatcgatggcggtgtcgccaccggcacgaccggc
atcggcgtcattaatgctggaggcagtggagcggccacgttggccgatggcatcctggtg
gtgcaggccctgaatggtggtcgcaccgcgccgggcgcgttttcgctgttcgcaccggtt
gcggccggtgcctacgagtacttcctgttcaagggcggtgtcagtgccggtaccagcgaa
aactggtacctgcgctcgaccgtggtggccggcccggcaccggcgcccaacggaagcggt
atcaatggcgtaccgccgccgccgacgccacccgtcgcacccccaccaccgatcactccg
gcaccgccaccgccgcccgaaggtgccaccgatccggatctgaccgcaggcgagaccgcg
ccgccaccaccgccgccggaacccgtgccggtggcgccgcccagtgatccggcggtgccg
gacgtaccggtggcgggtggcagcctgcccggtaccggtgcgccgccgacgccgggtgca
cgccccgccgagggcgcagtggtgccgctgtaccgcgtggaaaccgccacctacgccgtg
gtgccgccgctgctgcgcgagacctcgctggccagcctcggcacgttccatgagcggcag
ggcgaacaacgcctgctgtacaaccagggcgcattccgcaccgcgtggggccggttggtg
gggcagagcagcgagatccaatggaagggtgatgcgaagcccggctttgatggcgatgtg
atgggcctacaggccggcctcgatgtgtgggccacggccaatgacaaccatcgcaaccag
atcggcgtgttcgtcggccgcacccgcgcgcagggcaagaccaccggcctggcactgggc
tgggagaacgtgcacgtggggcagaaccgcctggacgacaagcacgtgggcctgtactgg
acgttcaccgacagcagcggtggctacatcgacgccgtggcgatgcagagccgttacgac
ggccgcgtacgctcctcgcgtgggctaggcttcgggatcaagggcgatggcaccagcgtg
tcggtggaggcgggcaagccgctgctgcacctcggtcagtccgtatggtggctggaaccg
caggtacaggtgatctggcagcgcaccgcgctggacgaccgccgcgatgaagtatccagc
gtgcgtttcgacaacgacaatgcctggaccggccgcatcggcctgcgcctggccggcgac
taccagttggccgacaacggctggcaaccgtacttcaagctcaactactggcatggccgt
tccggcgaggaccgcgtcagcttcgacaacgacacgatcatcaattcgcagcgctcgcgt
gcactggaagccggcgtaggtgtggtcgggcgcttcaaccgcaccatcagcgcctatgcc
gtggccgactacacgcgcgaactgggcggcaaccgcaacgagaagcgccgcatcatcgaa
ggcaacatcggcctgcgcgcggactggtag
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