Sphingobacterium thalpophilum: NCTC11429_03919
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Entry
NCTC11429_03919 CDS
T06778
Symbol
rpoE_10
Name
(GenBank) Sigma-24
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC11429_03919 (rpoE_10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stha03021
]
NCTC11429_03919 (rpoE_10)
Transcription machinery [BR:
stha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC11429_03919 (rpoE_10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
HTH_11
HTH_24
HTH_23
Sigma70_ECF
HTH_Mga
HTH_10
UPF0122
HTH_50
HTH_Tnp_ISL3
HTH_17
HTH_AsnC-type
HTH_Tnp_4
Sigma70_r3
Phage_antitermQ
HTH_36
HTH_28
DUF6398
DUF6376
HTH_DeoR
EAP30
Motif
Other DBs
NCBI-ProteinID:
VTR49600
UniProt:
A0A4U9VQI4
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All DBs
Position
1:complement(4514938..4515528)
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AA seq
196 aa
AA seq
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MQDSEYATLSDGILVDLIRRDDERAFSVIYKRYSVPLYIHANRFIRDREETKDILQKVFV
KIWDIRGKLPADIKLSSYLYQVVKNELINHISHSKVVDRYLDSMSSFAVSYVSDTDHAIR
EKQLQAIIEREIENLPEKMREIFQLSRTHYLSHREIAEKLGISEKTVKNQISNALKLLRN
KLPLLLFILAFFPDRP
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacagcgaatacgccacactatccgacgggattctggtcgatctgattcgccgg
gatgacgagagagctttctctgtcatttacaagcgttacagtgttcctttgtacattcat
gccaatagatttatccgcgaccgtgaggaaacaaaagacatcctgcaaaaagtcttcgtt
aaaatctgggatatccgcggcaagctgccagcggatatcaagctatcttcctatctgtat
caggtcgtgaaaaatgaattaattaatcatatttctcatagcaaagtagtggacagatac
ctggatagcatgtcatccttcgccgtcagctatgtttcggacacagaccatgcaatccgc
gaaaaacagctgcaggcgatcattgaaagagaaattgagaatcttcctgaaaagatgcgt
gaaatatttcagttgagccgtacccattatttgagccacagggagattgccgaaaaactt
ggcatcagtgaaaaaaccgtaaaaaatcagatttcaaacgcgctaaaattattgcgcaac
aagctgcctctgctcttatttattcttgcattttttccagacaggccctaa
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