KEGG   Sphingobacterium thalpophilum: NCTC11429_03919
Entry
NCTC11429_03919   CDS       T06778                                 
Symbol
rpoE_10
Name
(GenBank) Sigma-24
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
stha  Sphingobacterium thalpophilum
Pathway
stha02020  Two-component system
Brite
KEGG Orthology (KO) [BR:stha00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NCTC11429_03919 (rpoE_10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:stha03021]
    NCTC11429_03919 (rpoE_10)
Transcription machinery [BR:stha03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NCTC11429_03919 (rpoE_10)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 GerE HTH_11 HTH_24 HTH_23 Sigma70_ECF HTH_Mga HTH_10 UPF0122 HTH_50 HTH_Tnp_ISL3 HTH_17 HTH_AsnC-type HTH_Tnp_4 Sigma70_r3 Phage_antitermQ HTH_36 HTH_28 DUF6398 DUF6376 HTH_DeoR EAP30
Other DBs
NCBI-ProteinID: VTR49600
UniProt: A0A4U9VQI4
LinkDB
Position
1:complement(4514938..4515528)
AA seq 196 aa
MQDSEYATLSDGILVDLIRRDDERAFSVIYKRYSVPLYIHANRFIRDREETKDILQKVFV
KIWDIRGKLPADIKLSSYLYQVVKNELINHISHSKVVDRYLDSMSSFAVSYVSDTDHAIR
EKQLQAIIEREIENLPEKMREIFQLSRTHYLSHREIAEKLGISEKTVKNQISNALKLLRN
KLPLLLFILAFFPDRP
NT seq 591 nt   +upstreamnt  +downstreamnt
atgcaggacagcgaatacgccacactatccgacgggattctggtcgatctgattcgccgg
gatgacgagagagctttctctgtcatttacaagcgttacagtgttcctttgtacattcat
gccaatagatttatccgcgaccgtgaggaaacaaaagacatcctgcaaaaagtcttcgtt
aaaatctgggatatccgcggcaagctgccagcggatatcaagctatcttcctatctgtat
caggtcgtgaaaaatgaattaattaatcatatttctcatagcaaagtagtggacagatac
ctggatagcatgtcatccttcgccgtcagctatgtttcggacacagaccatgcaatccgc
gaaaaacagctgcaggcgatcattgaaagagaaattgagaatcttcctgaaaagatgcgt
gaaatatttcagttgagccgtacccattatttgagccacagggagattgccgaaaaactt
ggcatcagtgaaaaaaccgtaaaaaatcagatttcaaacgcgctaaaattattgcgcaac
aagctgcctctgctcttatttattcttgcattttttccagacaggccctaa

DBGET integrated database retrieval system