Sphingobacterium thalpophilum: NCTC11429_04482
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Entry
NCTC11429_04482 CDS
T06778
Name
(GenBank) conjugal transfer nickase/helicase TraI
Organism
stha
Sphingobacterium thalpophilum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
PIF1
AAA_22
SLFN-g3_helicase
TsaE
AAA_11
Viral_helicase1
Helicase_RecD
NACHT
AAA_16
AAA
AAA_29
ABC_tran
cobW
TrwB_AAD_bind
SRP54
Mg_chelatase
AAA_33
ResIII
AAA_14
T2SSE
SH3_13
MobB
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
VTR52024
UniProt:
A0A4U9W1T8
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All DBs
Position
1:5102633..5104057
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AA seq
474 aa
AA seq
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MFIKNLFIQQFPWQPTAQQLDAFELLEEFLLSFDRQSCFVLRGYAGTGKTTLIAALVKVL
PALKKRAVLLAPTGRAAKVMSYYSGRKALTIHKKIYRKKSAVSFQMDFMLGENLHEDTLF
IIDEASMISNEPANVFSKSLLHDLIRYVQSGKNCTLLFVGDTAQLPPVGLSDSPALSPSY
LENEFQLCVYPLELTTVVRQSKDSGILYNATKIREQITSSTQEQYEFPFPKFITKGFKDL
YRMTGERLIEGINYAYDKYGIENTMIICRSNRSANLYNQNIRNRILFRDEELTGGDYIMV
VKNNYYWLQENNMGEGFIANGDMAKVRKVSNIHDQHGYRFADVTLEFIDLDEIEPITCRV
ILDSLYADGPSLSYDDQKNLYEEIALDYADIPDKKDRLEAIKKDPYYNALQIKFAFAVTC
HKAQGGQWPIVFVDQGYVNDEMLDLEFLRWLYTAVTRATQELFLVNFSENFYPS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgttcatcaaaaatctattcatacagcaattcccctggcagccgaccgcacaacagctg
gatgcgttcgaattattggaagagttcttattatcctttgacagacagtcctgttttgtg
ctccgtggatatgccggcaccggaaaaactacgctgattgccgcattggtgaaggtgtta
cctgccttaaaaaaaagagctgttctgttggcccctacaggcagggctgccaaggtcatg
agctattattccggaagaaaagcgctgacgattcataaaaaaatttaccgcaagaaatcc
gcagtttcctttcaaatggattttatgctcggtgagaatctgcatgaggacacattgttc
atcattgacgaagcttccatgatatccaacgaaccggcgaacgtcttttccaagagctta
cttcacgatctgatccgttatgtacagtcgggcaaaaactgcacactgctctttgtcggc
gatacagcacagttaccgcctgtaggtctgtcggatagtcccgcactgagccccagctac
ctggagaatgagtttcaactctgtgtgtatccccttgaattgaccacagtggtcaggcaa
tccaaagactcaggcattttatacaacgctacaaaaatacgtgagcagatcacttcgagc
acacaggaacaatatgaatttcctttccccaaattcataacaaaaggatttaaagacctt
tatcgtatgacgggtgaacgactgattgaaggtatcaattatgcttatgacaagtacggc
attgaaaacacaatgatcatctgccggtcaaaccggtccgccaacctttataatcagaat
atccggaataggatcttgtttcgcgatgaagaactgacaggtggggattatattatggtc
gtcaaaaacaattattactggctgcaggagaataatatgggcgaaggttttattgccaac
ggtgatatggccaaagtgcgaaaagtcagtaatatacacgaccaacatggttatcgcttc
gccgatgtaaccctagaattcatagacttggatgaaatagaacccattacctgtagagtg
atcctcgacagcctttatgccgacggccccagcctttcctacgatgatcaaaagaacctt
tatgaggagatcgccttggattatgcagatatccctgacaaaaaagaccggctggaagcc
ataaaaaaagacccatattacaatgcgctgcaaatcaaatttgcctttgctgtcacttgt
cataaagcacagggcggacaatggcccattgtttttgtagaccagggctatgtgaacgat
gaaatgttggacctcgaattcctgcgatggctgtatacagctgtcacacgggctacacag
gaactttttttggtcaattttagtgaaaatttttatccatcatag
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