Caldimonas thermodepolymerans: IS481_01885
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Entry
IS481_01885 CDS
T06911
Name
(GenBank) TIGR02099 family protein
Organism
sthm
Caldimonas thermodepolymerans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsmA_2
DUF3971
AsmA
DUF748
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QPC31961
LinkDB
All DBs
Position
381405..385487
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AA seq
1360 aa
AA seq
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MSAFPSPSPLAPAWRVLRTVLKAAAGVVLFAWMLILAAWLTLHWLILPRIDQWRPQIERS
ASQAIGQSVRIGQIQVRSHGWIPTLELRDVVVEDAAGREALRLARVHAALSAASVLHFEL
RLRQLLLEAPTLEVRRDAQGRLHVAGLELRDDGGGDGALADWLFRQDELAVLDGTLRWVD
EQRQAPPLALHDVDLVLRNGSSIGTRRHEIRLDATPPPGWGERFSLRGRYTHALLGRPGD
WRHWSGTTHADLPHADLQTLRRYVDLPFELGAGDGALRLWLDLRDGQWRSATADLALRAV
HVRLAPQLPPLALEQLQGRVQARRDGADHRVEAQGLAFRTGEGLDWPAGDWSLQWRAGDA
GVADGEFRATQLDLAVLAQLAERLPLGDALRARLAELQPRGRVQGVQLRWDGPPEAPTGY
RAQGRVEGLHLAAQPRPDDAGEGWIGRPGLDGAAIEFSASDTGGQAALRIEAGALAFPGV
FDEAAIPLERLEARLDWAIRPAAGGDGALPAVELHVREARFANADAEGRLQARWRTGPAP
DGHLPGVLDLQGRLTRADATRTWRYLPASIPADVRDYVRRAVIEGRSRDVEFAVQGDLRQ
FPFADPRQGTFRIASRVEDARFAYAPPDDGEPAGWPAFTDVHGLLVFEGTAMHIRDARAR
LYGFQLQQVHGGIADLSHDPQLVLDGQGQGPLADALRFVRETPIDGWTQHALAQASGSGA
AHLKLGVRIPLDHMDAARVDGEVTLQGNEVQITPDTPRMAQARGVVRFSDRGFSIQGGAA
RVLGGMASFEGGTQKDGTLRFSGRGVATAEGLRQARELGVVPYLGEHLQGQAGYRVGLDI
VRGLPELTIHSDLVGLAMALPAPLAKPAEAAWPLAVRTMLRPAVPGQPARDSIAVLLSDV
LELRYERLRQDDGWRVVAGAVGIGTPAPEPAPGGIARVRVPRLDVDAWRAVAASFEGSLD
DAAAAGAPGGGYLPAMIALQADEVQVDHRRIDRVVAGLSQVDGLWRLTLDAEQLSGYLEY
RPPRGSRGGAGGRVYARLSRLSLPESAAEDLETLLDQDPETVPALDIVVDDFRLHDMHLG
RVEVEASNWRTGEIREWRLDKFHLTNADARLEATGHWRGVAGDTGRRRAVMDFELAVADS
GRLLQRLQFGEVTRGGKGRLQGQVSWLGSPLALDLPTLEGNLNVDIHQGQFLKADPGIAK
LAGVLSLQALPRRLTLDFRDVFQEGFAFDAFTGDVKIQNGVAYTNNLRLRGLTAAVLMEG
RADIARETQDLRVVVVPEINAGTASLAYAAINPAVGLGTFLAQWFLRKPLMEAGTREFHV
TGRWDDPKVEQVPHAPGRVSAAEADAGDGSAPPAQPQEVH
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgtttccctccccgagtcccctggcgcccgcctggcgcgtgctgcgcaccgtg
ctcaaggcggctgccggcgtggtgctgttcgcgtggatgctcatcctggcggcgtggttg
acgctccactggctgattctgccgcgaatcgaccaatggcgtccgcagatcgaaagatcg
gcctcgcaggcaatagggcagtcggtgcgcatcgggcagatccaggtccggtcgcacggc
tggatcccgaccctggaactgcgcgacgtggtcgtcgaggacgcggccggccgcgaggcg
ttgcggctggcgcgcgtgcacgcggcgctgtcggctgcctcggtgctgcacttcgagctg
cgcctgcgccagctgctgctggaagcgccgacgctggaggtgcgccgcgacgcgcagggt
cggctgcacgtcgccgggctggagctgcgcgatgacggcggcggcgacggcgcgctcgcg
gactggctgttccgccaggacgagctggcggtgctggacggcacgctgcgctgggtcgac
gagcagcgccaggccccgccgctggccctgcacgacgtcgacctggtgctgcgcaacggt
tcgtcgatcggcacgcgccggcacgagatccggctcgacgcgacgccgccgcccggctgg
ggcgagcgcttctcgctgcgcggccgctacacccatgcgctgctgggccggccgggcgac
tggcggcactggagcgggaccacccacgccgacctgccgcacgccgacctgcagaccctg
cgccgctacgtcgacctgccgttcgagctgggcgcgggcgacggcgcgctgcgcctgtgg
ctggacctgcgcgacggccagtggcgttccgccaccgccgacctcgcgctgcgcgccgtg
catgtgcggctggccccgcagctgccgccgctggcgctggagcagctgcagggccgggtg
caggcgcggcgcgacggcgccgaccaccgggtcgaggcgcaggggctcgccttccgcacc
ggcgaggggctggactggccggccggcgactggagcctgcaatggcgcgccggcgatgcc
ggcgtggccgacggcgagttccgcgccacgcagctggacctcgcggtgctggcccagctg
gcggagcgcctgccgctgggcgacgcgctgcgcgcgcggctggccgaactgcagcctcgg
ggccgggtgcaaggggtgcagctgcgctgggacggtccacccgaggcgcccaccggctac
cgggcccaggggcgggtcgagggcctgcacctggccgcacagccgcgtccggacgacgcc
ggggagggctggatcggccggccgggcctggacggggcggccatcgagttcagcgccagc
gacaccggcggccaggcggcgctgcgcatcgaggccggggcgttggcgtttcccggcgtg
ttcgacgaggcggcgatcccgctcgagcgcctcgaggcgcggctggactgggccatccgc
cccgccgccggcggtgacggcgcgctgccggcggtcgagctgcacgtgcgcgaggcgcgc
tttgccaatgccgacgcggaaggtcggctgcaagcccgttggcgcaccggccccgcgccg
gacgggcacctgcccggcgtgctggacctccagggacgactgacgcgcgccgacgcgacg
cgcacctggcgctacctgcccgcctcgatcccggccgacgtgcgcgactacgtgcgccgc
gcggtgatcgagggccgctcgcgcgacgtcgagttcgcggtgcagggcgacctgcgccag
ttccccttcgccgatccgcggcagggcacgttccgcatcgcctcgcgggtcgaggacgcg
cgcttcgcctacgcgccgccggacgacggcgagccggccggctggccggcgttcaccgac
gtgcacgggctgctggtgttcgagggcacggccatgcacatccgcgacgcgcgtgcgcgg
ctgtacggcttccagctgcagcaggtgcacggcggcatcgccgacctgtcgcacgatccg
cagctggtgctcgacgggcagggccaggggccgctggcggacgcgctgcgcttcgtgcgc
gagacgccgatcgacggctggacccagcacgcgctggcccaggccagcggcagcggcgcg
gcgcacctgaagctcggcgtgcgcatcccgctggaccacatggacgccgcgcgcgtcgac
ggcgaggtgacgctgcagggcaacgaggtgcagatcacgcccgacaccccgcgcatggcg
caggcacgcggcgtggtgcgcttctccgatcgcgggttctcgatccagggcggcgccgcg
cgcgtgctgggcggcatggcgagcttcgagggcggcacgcagaaggacgggaccctgcgc
ttcagcggccgcggcgtcgccaccgccgaaggcttgcgccaggcgcgcgagctgggcgtg
gtgccctacctgggcgagcacctgcaggggcaggccggctaccgtgtcggcctggacatc
gtgcgcgggctgcccgagctgacgatccacagcgacctggtgggcctggccatggcgctg
cccgcgccactggccaagcccgccgaggccgcctggccgctggcggtgcgcacgatgctg
cggcctgccgtccccggccagccggcgcgcgacagcatcgcggtgctgctgtccgacgtg
ctggagctgcgctacgagcgcctgcgccaggacgacggctggcgcgtcgtggccggcgcg
gtcgggatcggcaccccggcgccggagcccgcgcccggcgggatcgcgcgcgtgcgcgtg
ccgcggctggacgtggacgcctggcgcgcggtggccgcctccttcgagggcagcctggac
gacgccgcggcggcgggggcgccgggcggcggctacctgcccgcgatgatcgcgttgcag
gccgacgaggtgcaggtcgaccaccggcgcatcgaccgggtggtggccgggctgtcgcag
gtcgacgggctgtggcggctgacgctcgatgccgagcagctcagcggctacctcgaatac
cggccgccgcgcggctcgcgcggcggggccggcgggcgcgtctatgcgcggctgtcgcgc
ctgtcgctgccggaaagcgccgccgaggacctcgagacgctgctcgaccaggaccccgag
acggtgccggcgctggacatcgtggtcgacgacttccgcctgcacgacatgcacctcggc
cgcgtggaggtcgaggcgagcaactggcgcaccggcgagatccgcgaatggcggctggac
aagttccacctgaccaacgccgatgcgcggctggaggccaccggccactggcgcggcgtg
gccggcgacaccggacggcgccgcgcggtgatggacttcgagctggccgtggccgacagc
ggccggctgctgcagcgcctgcagttcggcgaggtgacgcgcggcggcaagggccggctg
caaggccaggtcagctggctgggctcgccgctggcgctggacctgccgaccctggaaggc
aacctcaacgtcgacatccaccagggccagttcctcaaggccgaccccggcatcgccaag
ctggccggcgtgctcagcctgcaggcgctgccgcggcggctgacgctggacttccgcgac
gtgttccaggagggctttgccttcgacgccttcacgggcgacgtgaagatccagaacggc
gtggcctacaccaacaacctgcgcctgcgcggcctgaccgccgcggtgctgatggaaggc
cgcgccgacatcgcgcgcgagacgcaggacctgcgcgtcgtcgtggtgcccgagatcaac
gccggcaccgcctcgctggcctatgccgcgatcaacccggcggtggggctgggcaccttc
ctcgcacaatggttcctgcgcaagccgctgatggaggccggcacgcgcgagttccacgtc
accggccgctgggacgatcccaaggtggagcaggtgccgcacgcacccgggcgggtgagc
gcggccgaggccgacgccggggacgggagcgcgccgccggcccagccacaggaggtgcac
tga
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