Caldimonas thermodepolymerans: IS481_06490
Help
Entry
IS481_06490 CDS
T06911
Name
(GenBank) ROK family transcriptional regulator
Organism
sthm
Caldimonas thermodepolymerans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ROK
MarR_2
HTH_IclR
HTH_24
MarR
HTH_27
HTH_Crp_2
HTH_AsnC-type
HTH_36
HTH_5
Motif
Other DBs
NCBI-ProteinID:
QPC32794
LinkDB
All DBs
Position
1348843..1350120
Genome browser
AA seq
425 aa
AA seq
DB search
MARLQSRQISHLHQYQVLHTVRLAGAPVSRAEIAEATGLSQPAVSSLTRRLIETGALKEA
GARPSNGIGRRERELEINGDFAWVIGVKLSMDHFTITVTDFAGRMRRSEDVAWNTPVATA
GLLDALAAAVQRCLEATPELERSRLAGVGVAVPGFVDSIHGRVLWSPVLTPESTGPHTPA
LDQALAARLGVPVFVENDANMLALADQWYGRSGHASHVAVVTLEHGLGLGLVVNGELYRG
HSGLAAELGHVQIEPEGRACRCGKRGCLEAYVAHYAVAAAGAEAGLIPRCEPASGAPERA
YFELAQLAHAGNARAREIFEKQGRLLGQWIGNVVNLMSPQLVILCGGPPLASDLFLPSLR
QAMEQAMALPHRGEVPLVIDHQGDEIWARGAASLVLQRVDESAEIIESVARHAFDSLNHG
RRPAL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtttgcagtcccgacagatctcccacctgcaccagtaccaggtgctgcacacc
gtccggctggccggcgcacccgtctcgcgtgccgagatcgccgaagccaccggcctcagc
cagccggcggtgtcctcgctgacgcgccggctgatcgagaccggcgcgctcaaggaagcg
ggggcacggccgtccaacggcatcggccggcgcgagcgcgagctggagatcaacggcgac
ttcgcctgggtcatcggcgtcaagctctcgatggaccacttcacgatcaccgtcaccgac
ttcgccgggcgcatgcgccgcagcgaggacgtggcctggaacacgccggtggccaccgcg
gggctgctcgacgcgctggccgcggcggtgcagcgctgcctggaggcgacgccggagctg
gagcgcagccgcctggccggcgtcggggtggcggtgccgggcttcgtcgactccatccac
ggccgcgtgctgtggtcgccggtgctcacgcccgagagcaccgggccgcataccccggcg
ctggaccaggcgctggccgcgcgcctgggcgtgccggtgttcgtcgagaacgacgccaac
atgctggcgctggccgaccagtggtacgggcgctcgggccatgcctcgcacgtcgcggtg
gtgacgctggagcacgggctcggcctgggcctggtggtcaacggcgagctctaccgcggc
cactcggggctggcggccgaactgggccacgtgcagatcgagcccgaggggcgcgcctgc
cgctgcggcaagcgcggctgcctggaggcctacgtcgcccactacgcggtggccgcggcc
ggcgccgaggccgggctgatcccgcgctgcgagccggccagcggggcgccggagcgcgcc
tacttcgagctggcgcagctcgcgcatgccggcaatgcgcgggcgcgcgagatcttcgag
aagcaggggcgcctgctcggccagtggatcggcaacgtcgtgaacctgatgtcaccgcag
ctggtgatcctgtgcggcggcccgccgctggcctcggacctgttcctgcccagcctgcgc
caagccatggagcaggccatggcgctgccgcatcgcggcgaggtgccgctggtgatcgac
caccagggcgacgagatctgggcgcgcggcgcggcttcgctggtgctgcagcgcgtggac
gaatcggcggaaattatcgagtcggtggcgcgccacgccttcgacagcctcaaccacggg
agacggcccgctttgtga
DBGET
integrated database retrieval system
