Caldimonas thermodepolymerans: IS481_09420
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Entry
IS481_09420 CDS
T06911
Name
(GenBank) ABC transporter substrate-binding protein
KO
K13893
microcin C transport system substrate-binding protein
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IS481_09420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sthm02000
]
IS481_09420
Transporters [BR:
sthm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
IS481_09420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QPC33392
LinkDB
All DBs
Position
complement(2013306..2015180)
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AA seq
624 aa
AA seq
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MVTFRGAGRSGRIARMIRVLAKFLLCAWVAAGSSLAQAAHAYAQFGDIKYPPGFSHFDYV
NPDAPKGGEIVLVPPTRISNFDKYNPFTLKGTAPPGLGSLLFETLLTGTLDEPTTAYGLL
AEDVTVAPDRRSATFRLNPKARFHNGDPVLAADVKHSFDTLMSKEAAPQFRVYFGDIAGA
TVLGERTVRFDFRHDSAELPLLVGTALPVFSRKWGEVDGQRKPFDQVILDTPIGSGPYRI
GRVNFGRDITYVRDPEYWARDLNVRRGMFNFDRITYKVYADDKVRLEAFKAGEFDFIQAF
VAKEWAREYKGRKFDSGELVKRELPHGNAGDFQGFLFNIRREKFQDVRVREAIGLAMDFE
WMNRQLFYNAYTRVRGYFVASDFEARDMPTPEELALLEPLRAHLPEAVFTQPVPLPPRTD
TPGGLRANLRRAKALLEEAGWTYRDGALRDRQGREFTIEFLDNQGSMARVVTPMMQNLEK
LGIRSTYKVVDFALLQKRMDVFDFDIISVRIVGSEAPGAELVARFGSEAADTEGSSNLIG
IKSPAVDALLRKVVAARTRDELVPALRALDRVLRHGHYTIPAWYASTFRVAYRGGRFVLP
PVIPRYYSPEGWALSTWWADPRNR
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
ctggtgacgttccggggcgcgggacgttcgggcagaatcgcccgcatgatccgtgtcctg
gcaaagttcctgctgtgtgcgtgggtggcggccggcagttcgcttgcgcaggccgcccat
gcatacgcccagttcggcgacatcaagtacccgcccggcttttcgcacttcgactacgtc
aacccggacgcccccaagggcggggagatcgtgctggtcccgcccacgcggatcagcaac
ttcgacaagtacaacccgttcacgctcaagggcacggccccgccggggctgggctcgctg
ctgttcgagaccctgctgaccggcacgctggacgagccgaccaccgcctacgggctgctg
gccgaggacgtcacggtcgcgcccgaccggcgcagcgcgacctttcgcctgaacccgaag
gcgcgtttccacaacggcgacccggtgctcgcggccgacgtcaagcactccttcgacacg
ctgatgagcaaggaggcggcgccgcagttccgcgtctacttcggcgacatcgccggcgcg
acggtgctgggcgagcgcaccgtgcgcttcgacttcaggcatgacagcgccgagctgccg
ctgctggtgggcacggcactgccggtgttcagccgcaagtggggcgaggtcgacgggcag
cgcaagccgttcgaccaggtcatcctcgacacgccgatcggttccggcccgtaccgcatc
gggcgggtcaacttcgggcgcgacatcacctacgtgcgcgatccggagtactgggcgcgc
gacctcaacgtgcggcgcggcatgttcaacttcgaccgcatcacctacaaggtgtacgcc
gacgacaaggtgcgcctggaggcgttcaaggccggcgagttcgacttcatccaggccttc
gtcgccaaggaatgggcgcgcgaatacaagggccgcaagttcgactcgggcgaactggtc
aagcgcgagttgccgcacggcaatgccggcgacttccagggcttcctgttcaacatccgg
cgcgagaagttccaggacgtgcgcgtgcgcgaggcgatcgggctggcgatggacttcgag
tggatgaaccgccagctgttctacaacgcctacacccgggtgcgcggctacttcgtcgcg
agcgacttcgaggcccgggacatgcccacgcccgaggagctggcgctgctcgagccgctg
cgcgcgcacctgcccgaggcggtcttcacgcagccggtgccgctgccgccgcgcaccgac
acgccaggcggcctgcgcgccaacctgcgccgcgccaaggcgctgctggaggaggccggc
tggacctaccgcgacggcgcgctgcgcgaccgccagggtcgcgagttcacgatcgagttc
ctcgacaaccagggctcgatggcgcgggtggtcacgccgatgatgcagaacctggagaag
ctgggcatccgctccacctacaaggtggtggacttcgcgctgctgcagaagcgcatggac
gtgttcgacttcgacatcatcagcgtgcgcatcgtgggcagcgaggcgcccggcgccgag
ctggtggcacggttcggctcggaggcggccgataccgagggctcgagcaacctcatcggc
atcaagagcccggcggtcgacgcgctgctgcgcaaggtggtcgccgcgcgcacccgcgac
gagctggtgccggcgctgcgcgcgctggaccgcgtgctgcgccacggccactacaccatc
ccggcgtggtacgcgagcaccttccgggtggcctaccgcggcgggcgcttcgtgctgccg
ccggtgatcccgcgctactactcgccggaaggctgggcgctgtccacctggtgggccgac
ccgcgcaaccggtga
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