Caldimonas thermodepolymerans: IS481_14665
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Entry
IS481_14665 CDS
T06911
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IS481_14665 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sthm03400
]
IS481_14665 (mutM)
Enzymes [BR:
sthm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
IS481_14665 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IS481_14665 (mutM)
DNA repair and recombination proteins [BR:
sthm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IS481_14665 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
RNHCP
zinc-ribbons_6
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QPC30966
LinkDB
All DBs
Position
3112452..3113267
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AA seq
271 aa
AA seq
DB search
MPELPEVEVTRLSFADRIQGARIEAVRLGKPLRWPLGCAPERLVGQAVGTVSRRGKYLWM
ALDEGGLLLHLGMSGSLRFAPLAPPPGPHDHFDLATDRGLLRLHDPRRFGAVVWAPALDA
PPAVKLLGTLGIEPFDPAFDGAYLHQRLRGRRVSIKQALLAGDIVVGVGNIYASEALFGA
GIDPRTAAGRIGLARCERLAASIRTTLRRALEVGGSTLRDFRNAEGQSGYFQLETQVYDR
EGLPCRRCGTPVRRIQQGQRSTFFCPQCQRR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttaccggaagtcgaagtcacgcggctgagctttgccgaccgcatccagggc
gcccgcatcgaggcggtgcgcctgggcaagccgttgcgctggccgctcggctgcgcgccc
gagcgcctggtgggccaggccgtcggcacggtcagccggcgcggcaagtacctgtggatg
gcgctcgacgagggcggcttgctgctgcacctggggatgtccgggtcgctgcgcttcgcg
ccgctggccccgccacccggcccgcacgaccatttcgacctggccaccgaccgcggcctg
ctgcgcctgcacgacccgcgccgcttcggcgccgtggtgtgggccccggcgctggacgcg
ccgcccgcggtcaagctgctcggcacgctgggcatcgagccgttcgacccggccttcgac
ggcgcctacctacaccagcggctgcgcgggcggcgcgtgtcgatcaagcaggcgctgctg
gccggcgacatcgtcgtcggcgtgggcaacatctacgcgtccgaggcgctgttcggcgcg
ggcatcgatccgcgcaccgccgccgggcggatcggcctggcgcgctgcgagcgcctggcg
gcatcgatccggaccaccctgcgccgcgcgctggaggtcgggggctcgaccctgcgcgac
ttccgcaacgccgaggggcaaagcggctacttccagctcgagacccaggtctacgaccgc
gagggcctgccctgccggcgctgcgggaccccggtgcgccgcatccagcagggccagcgg
tcgaccttcttctgtcctcagtgccagcgccgctga
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