Caldimonas thermodepolymerans: IS481_16545
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Entry
IS481_16545 CDS
T06911
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm01501
beta-Lactam resistance
sthm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IS481_16545
01503 Cationic antimicrobial peptide (CAMP) resistance
IS481_16545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sthm02000
]
IS481_16545
01504 Antimicrobial resistance genes [BR:
sthm01504
]
IS481_16545
Transporters [BR:
sthm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IS481_16545
Antimicrobial resistance genes [BR:
sthm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IS481_16545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QPC31307
LinkDB
All DBs
Position
complement(3494904..3498047)
Genome browser
AA seq
1047 aa
AA seq
DB search
MSSRFFIERPIFAAVLSIIIVLAGLVALKILPIAQYPEIAPPTVTITANYPGASAETLAK
TVAAPIEEQLSGVENLLYFSSTSSSDGSLTITATFEVGTDIDKATFNVNNRVQLATPRLP
DEVRRNGVVVAKRSENFLLVIALTSPNGTRDELFLSNYATQNILDELKRIPGAAEVLVFG
ARDYSMRVWLQPDKMAQLGVTTSDIAAAINAQNAQYAAGKIGADPAPKGQELVYTVTARG
RLVEPEEFGEIVLRSTAGGGVLRLKDVARIELGAQSYAQSSTVNGQPAIAIGVFLQSGAN
ALDVADAVKAKMVELRNERFPDDVDYRIPYDTTRFVSASINEVMHTVIEAAIIVLLVVFV
FLQTWRATLIPMLAVPVSLIGTFAGLWLFGFSINTLTLFAMVLAIGIVVDDAIVVLENVE
RLMREEKMSPFAAAVEAMREVSGAVIGIVLVLCAVFIPVAFMGGIAGQLYRQFAVTVAIA
VVLSGIVALTLTPSLCALLLKPHHDGVTWGQKFFAPFNRGFDWLTKRFLGGVSFALKRRL
VALLGFVLMLGVASYLLWRVPGSFVPEEDQGFILSAVVLPDGATLERTERTTEQLRQMNA
QNDAIDSFFIINGFDLIGGGAKSNSATIFVTMKPWDERTQSTQELAQQVSGMGFALKDGI
AFAFNPPGIQGLGQAGGFEVYVQARSDSDPQRLAQVTQDFMAALMQHPMLGQVQTFYRPT
VPQLRVEVDREKALALGVPVNEVFAALQAQMGSLYVNDFNRSGRTYRVTIQADAPFRSKP
EDLGRLYVRSQTTGQMVPLKTLIRVDSVIGPEQIERYNSYVAAKVMGSAKPGYSSGEAIK
AVEEVARQVLPQGYSYEWTGQAFQEKRTGSASVFAFGFALVMVYLILSALYERWGVPFAV
VLAVPFAVTGALLAVWLRGMENDIYFQIGLVVLIGLAAKNAILIAEFAMQGMEQGKKAAE
AALEAARLRFRPIVMTSLAFVLGVVPLVFATGAGAAARQSMGTGVFGGMLVATFVAPIFV
PLFFALLARKPRPQHSHAPGATEEVPV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccgcttcttcatcgaacggccgatcttcgccgccgtcctgtccatcatcatc
gtgctggcaggcctggtcgcgctgaagatcctgccgatcgcccagtatcccgagatcgcg
ccgccgacggtgacgatcaccgccaactaccctggcgcctcggccgagacgctggccaag
accgtggccgcgccgatcgaggagcagctctcgggcgtcgagaacctgctgtacttcagc
tcgacctcgtcgtccgacggctcgctcacgatcaccgccaccttcgaggtcggcaccgac
atcgacaaggcgaccttcaacgtcaacaaccgggtgcagctcgccacgccccggctgccc
gacgaggtgcgccgcaacggcgtggtggtggccaagcgcagcgagaacttcctgctcgtg
atcgcgctgacctcgcccaacggcacgcgcgacgagctgttcctgtcgaactacgcgacg
cagaacatcctcgacgagctcaagcgcatccccggcgcggcggaagtgctggtgttcggc
gcgcgcgactactcgatgcgcgtgtggctgcagccggacaagatggcccagctgggcgtg
accacctcggacatcgccgcggcgatcaacgctcagaacgcccagtacgcggccggcaag
atcggcgcggatccggcgcccaagggccaggagctggtctacaccgtcacggcgcgcggc
cgcctggtcgagccggaggagttcggcgagatcgtgctgcgttccaccgcgggcggcggc
gtgctgcgcctgaaggacgtcgcgcgcatcgagctgggcgcgcagagctacgcccagtcg
agcacggtcaacggccagccggcgatcgccatcggcgtgttcctgcagtccggcgccaac
gcgctcgacgtggccgacgcggtcaaggccaagatggtcgagctcaggaacgagcgcttc
ccggacgacgtcgactatcgcatcccgtacgacacgacccgcttcgtctcggcctcgatc
aacgaggtgatgcacaccgtgatcgaggcggcgatcatcgtgctgctggtggtgttcgtg
ttcctgcagacctggcgcgcgacgctgatcccgatgctggcggtgccggtgtcgctgatc
ggcaccttcgccggcctgtggctgttcggcttctcgatcaacacgctgacgctgttcgcg
atggtgctggccatcggcatcgtggtggacgacgcgatcgtggtgctggagaacgtcgag
cgactgatgcgcgaggagaagatgtcgccgttcgcggcggccgtggaggccatgcgcgag
gtctcgggcgcggtgatcggcatcgtgctggtgctgtgcgccgtgttcatcccggtggcc
ttcatgggcggcatcgccggccagctgtaccgccagttcgcggtgacggtggcgatcgcc
gtggtgctgtcgggcatcgtcgcgctgacgctcacgccgtcgctgtgcgcgctgctgctc
aagccgcaccatgacggcgtgacctggggccagaagttcttcgcgccgttcaaccgcggc
ttcgactggctgaccaagcgcttcctgggcggcgtcagcttcgcgctcaagcgccggctg
gtcgcgctgctgggcttcgtgttgatgctgggcgtggccagctacctgctgtggcgcgtg
ccgggcagcttcgtgccggaggaggaccagggcttcatcctgtcggccgtggtgctgcct
gacggggcgacgctggagcgcaccgagcgcaccaccgagcagctgcgccagatgaacgcg
cagaacgatgccatcgacagcttcttcatcatcaacggcttcgacctgatcggcggtggc
gccaagagcaactcggcgaccatcttcgtgacaatgaagccgtgggacgagcgcacccag
tcgacccaggagctcgcgcagcaggtcagcggcatgggcttcgcgctcaaggacggcatc
gccttcgcgttcaacccgccgggcatccagggcctgggccaggccggcggcttcgaggtg
tacgtgcaggcgcgcagcgacagcgacccgcagcgcctcgcgcaggtcacgcaggacttc
atggcagcgctgatgcagcacccgatgctgggccaggtgcagaccttctaccgcccgacc
gtgccgcagctgcgcgtcgaggtcgaccgcgagaaggcgctcgcgctgggcgtgccggtc
aacgaggtgttcgcggcgctgcaggcgcagatgggctcgctgtacgtgaacgacttcaac
cgttccggccgcacctaccgcgtcacgatccaggccgacgcgccgttccgctcgaagccg
gaagacctgggacgcctgtacgtgcgctcgcagaccaccggccagatggtcccgctcaag
acgctgatccgcgtcgacagcgtgatcggccccgagcagatcgagcgctacaactcctac
gtcgccgccaaggtgatgggcagcgccaagcccggctacagctccggcgaggcgatcaag
gccgtcgaggaggtggcgcgccaggtgctgccgcagggctacagctacgagtggaccggc
caggccttccaggagaagcgcaccggcagcgcctcggtgttcgccttcggcttcgcgctg
gtgatggtctacctgatcctgtcggcgctgtacgagcgctggggcgtgccgttcgcggtc
gtgctggccgtgccgttcgcggtgaccggcgcgctgctggcggtgtggctgcgcggcatg
gagaacgacatctacttccagatcggcctggtggtgctgatcggcctggcggcgaagaac
gcgatcctgatcgcggagttcgcgatgcagggcatggagcagggcaagaaggccgccgag
gcggcgctggaagccgcgcgcctgcgcttccgcccgatcgtgatgacctcgctggccttc
gtgctgggcgtggtgccgctggtgttcgccaccggcgccggtgccgcggcgcgccagtcg
atgggcacgggcgtgttcggcggcatgctggtcgccaccttcgtcgcgccgatcttcgtg
ccgctgttcttcgcgctgctggcgcgcaagccgcggccgcagcacagccatgcgcccggc
gccaccgaggaggtgccggtatga
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