Sulfobacillus thermotolerans: BXT84_01535
Help
Entry
BXT84_01535 CDS
T06144
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sthr
Sulfobacillus thermotolerans
Pathway
sthr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sthr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BXT84_01535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sthr03400
]
BXT84_01535
Enzymes [BR:
sthr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BXT84_01535
DNA repair and recombination proteins [BR:
sthr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
BXT84_01535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TRCF
CarD_TRCF_RID
UvrB_inter
Helicase_C
ResIII
SNF2-rel_dom
MFD_D3
RecG_dom3_C
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AUW92797
UniProt:
A0A3S6Z1S6
LinkDB
All DBs
Position
277688..281194
Genome browser
AA seq
1168 aa
AA seq
DB search
MADLSSLRTLWSGYAPVQELTDALRSGKTAHVFGLSGSLPSFLAAHVVDGISRPVLVVTV
GFAEAQTFEAELVQFLPGRPIHLLPPRPHVVGEVQAQSHEWTLRRLEALDQAANDPRTIL
VAPVEAVRQLVMPVLQKALHLHVGDVVDPEVVMGRLVQLGYRREVEVGEEATYAVRGGII
DVYVPGGPAYRIEWFGDEIDSIRVFDVVSQKTVEMRQQAQIGLAREVLLTPAERDRGIER
IAHEASTLYHNLESMGQLDLAHKTKERFGHWLADLAEGRVFPGLERYGAAFYPLKAVTEI
FTTPPLVIYHDVPRITEALRGRDLDEAQERVRRLERGDFLPVEAESTLTQDQFFARLKGL
GELTLSLMPHPRKENGFHLNLTGRPAPRIHGQIDLLKAEVTRLRKSRLKVALILRDEAAI
KVMQRQLMDFGIPAHEGMGAVGEVGLLTGQLAHGFILSELGIAVLAETELSGREQPRLRR
AQEPKQTVRLADLKPGDYVVHITHGIGRYLGMVTLEIQNQHKDYLHVQYAGQDTLYVPTD
QLGLIQKYIGVEGQDPKLSKMGGQEWSRVKDKVRASVREMAKELIRLYAVRESRPGISFA
EDTPWQKDFESAFGYEETDDQLRSIEEIKRDMEKMRPMDRLLCGDVGYGKTEVALRAAFK
AIMSGKQVAFLVPTTLLADQHFSTAKARFAGFPVTVDVLSRFRTPKQQKQTLAQLAQGQV
DLIIGTHRLLGKDVKFRDLGLLIIDEEHRFGVAHKERIKALRENIDVLTLSATPIPRTLH
MAMVGVRDMSLIETPPLDRLPVETVVAEFDEALIQEAIRRELDRGGQVFYVQNRILAIDQ
TVSRLMKMFPEAAIGVIHGRMDETRIEDVMARFIEQEYDILVATSIIESGLDIPNANTLI
VEDADRMGLAQLYQIRGRVGRSARLAYAYFTYRRDKTLTPQAEKRLEAIREFTELGAGYQ
IALRDLEIRGAGNLLGSEQHGFIASVGFDLYTQLLAEAVRELKGEETPQDVDPAIDIAVD
AYLPDTYVNAASLKVSLYKRLVSAQSLEEIEALADEFVDRFGPVPAPVARLLQLGRVRVM
AKDMKIVQVSHKKDRIYLKSLPDAPIDNEALHRLARAYPGRLVPGAAKAPELSVRLPLRH
SVDQALDVAEDVLLTIRGAGANGKQESG
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggccgatttgagttcgctgcgcacgctgtggtccgggtatgcgccagtgcaagagtta
acggatgccttacgttccggaaaaacagcccacgtcttcggattgtcgggctctttgccg
tcctttcttgccgcccacgtagtggacggcatatcccgtcccgtcttggtagtgactgtg
gggtttgcggaagcgcagacgttcgaagcagaattggtacagtttttgcccggtcgtccc
attcacctgttgccgcccagaccgcatgtggtgggcgaggttcaggctcaaagccatgaa
tggacattgcgccggcttgaagcgcttgaccaggcggcgaatgatccccggaccatcttg
gtggcgccggtggaagctgtgcgccaattagtgatgccggtgttgcaaaaggccttgcat
ctccacgtcggcgacgtggtggaccctgaggtggtgatgggtaggttggtccagctcggg
tatcgccgcgaagtggaagtgggcgaagaggcgacgtatgcggtgcgaggcggcatcatc
gatgtctatgtgcccggaggcccggcttaccgcatcgaatggtttggagatgaaatcgat
tccatccgcgtttttgacgtggtttcacagaaaaccgtggaaatgcggcagcaggcgcaa
attgggttggcacgagaagtcttgttgacaccggccgaacgggaccgtggtattgagcgc
atagcccatgaggcatccacactttatcacaatctagaatccatggggcaattggatctc
gcccacaagacgaaagagcgctttgggcattggttagccgatcttgcagaagggcgagtt
ttccccggccttgagcgatacggcgcggccttttatccgcttaaggccgtgaccgaaatt
tttaccacgccaccattggtgatatatcatgatgtgccgcgcattaccgaagccctaagg
ggacgggatttggacgaggcgcaagagcgcgtaaggcgactggagcggggagattttttg
ccagtggaagcggagtcgaccttaacgcaggaccaattctttgcgcggttaaagggattg
ggcgagctcactttgtcactgatgccacatccccgcaaggaaaatggatttcatttaaat
ttgacggggcggccggcgccccggattcatgggcagatcgatttgctcaaagccgaagtg
acccgtttacgcaaatctagactgaaagtcgccttaattttgcgtgacgaggcggccatt
aaggttatgcagcggcagctgatggacttcgggattcccgcccacgaggggatgggagcg
gtaggcgaagtaggtttgttgacgggccaattggctcatggcttcatcttgtcggaactc
gggattgccgtattagccgagaccgaactgtcaggacgggaacagccgcgtttacgccgc
gcccaagaaccgaagcagacggtccgcttggccgatttgaagccgggggactatgtcgtg
catattacgcatggcattggacgctacctgggtatggtcacgctggaaattcaaaatcag
cataaagattacctgcatgtgcagtacgcagggcaggataccctctatgtgccaacggac
caattgggattaattcaaaaatacattggcgtcgaagggcaagatcctaaactgtccaaa
atgggcgggcaggaatggtcgcgggttaaagacaaagtccgcgcctctgtacgggaaatg
gccaaagaattaatccggctgtacgccgtaagggaatcgcggcctggcatcagctttgcg
gaagatacgccatggcagaaagatttcgaatcggcctttggctatgaggaaactgatgac
caactccggtctatcgaagaaataaagcgggacatggaaaaaatgcggcccatggaccgg
ctgctttgtggagacgtcggctacgggaaaaccgaggtagcattgcgtgctgcgtttaag
gccatcatgtccggtaagcaagtggcatttttggtgccgacgacgttgttagcggaccaa
catttttccacggcaaaagcccgatttgcgggattcccggtaacggtcgacgtgctaagc
cgatttcgtacgccgaagcaacagaagcagaccctcgcgcagttggcacaaggtcaagtt
gacctaattattggcacccatcgtctcttaggcaaggatgtgaaatttcgggatttgggt
ttgctcattattgatgaagaacatcgatttggtgtcgcgcacaaagaacgcattaaagct
ttgcgcgagaacattgatgtcttgacgttgtctgccacgccaattccccgcacgttgcac
atggcaatggtgggtgtgcgtgatatgagcctcattgagaccccaccgttggaccgcctg
cctgtagagacggtcgtagcagaatttgatgaggcgttgattcaagaagccattcgccgc
gaattggaccgcgggggtcaagtcttttatgtacagaaccgcatcttggcgattgaccag
acggtgtcacgtctgatgaaaatgtttccggaagcggccattggggtgattcatggccgg
atggacgaaacacgcattgaagacgtgatggcgcggtttattgagcaagaatacgatatt
ttagtggcgacaagtattattgaatcgggattagatattcccaatgccaataccttgatt
gttgaagatgccgaccgcatgggactggctcagttgtatcaaattcgagggcgggtggga
cgttcggcgcgcttggcctatgcctattttacctatcgtcgggataagacgttgacgccc
caagcggaaaaacggctggaagcgattcgcgaatttacagaactcggagcagggtaccaa
attgctttacgcgatttagagattcggggagcaggaaatctattaggttcggaacagcac
ggatttattgcatcggttggatttgatttgtatacacagttactcgccgaagcggttcgc
gaattaaagggcgaagaaacgcctcaagacgttgacccagcgatcgacatagccgtcgat
gcctatttaccggatacctatgtgaatgcggcaagccttaaagtgtctttgtataaacgg
ttggtatctgcgcaaagcttagaggaaatcgaagcgttagcggatgaatttgtcgatcgg
tttggtccagtgccagcaccagtggctcgcttgcttcaattgggacgagtgcgggtgatg
gccaaagacatgaaaatcgtccaagtcagtcacaaaaaggacagaatttatctcaaaagc
ttgcctgatgctcccatcgacaatgaggcgctgcatcgtttggcgcgcgcctaccctgga
cgtcttgtcccaggggccgctaaagctccggaactcagtgtcagactccctttacgccac
agtgtcgatcaagcactggatgttgcggaagacgtgttgctgaccatccgaggagcaggt
gccaatgggaaacaagaaagcggctaa
DBGET
integrated database retrieval system
