Sulfobacillus thermotolerans: BXT84_06520
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Entry
BXT84_06520 CDS
T06144
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
sthr
Sulfobacillus thermotolerans
Pathway
sthr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sthr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BXT84_06520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sthr03400
]
BXT84_06520
Enzymes [BR:
sthr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
BXT84_06520
DNA repair and recombination proteins [BR:
sthr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BXT84_06520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
Motif
Other DBs
NCBI-ProteinID:
AUW93638
UniProt:
A0A3S6Z5R8
LinkDB
All DBs
Position
1267369..1268202
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AA seq
277 aa
AA seq
DB search
MDIPHPERIIFPGSGVTRRQLVEYYAAVGPVLLSYYRNRALTMVRWPHGLGGPHFFQRHP
EGNSTQPITVDTVEQLIWWAARGTIEWHVPLNTLTAPNEHDWAVIDLDPPGSEWTPLMQA
ARIIQTLLDMLHVPHALKTSGRRGLHFFIRIEPENPGRVMAAIKALASIAVKTYPEVFTV
ERLKAKRQNKMYLDYLQNGPGRTMIGVYSVRSEEPGTVSCPLQPDDLHYPATHWTMERVS
KRLRREGDLFSLVPAIPLVQVLSRGGIHVDHMAGDIG
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggatattccccatccggaacgaatcatatttcctggtagcggcgtgacccggcgccaa
ttagtcgagtattatgcggccgtgggaccggtattgttgtcgtattatcgtaaccgcgcg
ctgaccatggtgcgctggccgcacgggctagggggcccccatttctttcaaagacatccc
gagggaaatagcacccaacccattacagtcgatacggtggaacagctgatctggtgggct
gcccgtggcacgattgaatggcatgtgccgcttaacacgttgacagcgccaaacgagcac
gattgggccgtaattgacctggatccacccggtagcgaatggaccccgttgatgcaagcc
gcgcggattattcaaaccttgttggacatgttgcacgtgccgcatgccttgaaaacctcc
ggccggcgcggtttgcacttttttatacgtattgaaccggaaaatccaggacgtgtgatg
gctgccatcaaggcgctcgcgtctattgccgttaagacctatccggaggtgtttacggtg
gagcgattaaaagcgaaaaggcagaacaagatgtacttagattatttgcaaaacggtcct
gggaggacaatgattggggtctattccgtacggtctgaggaaccggggaccgtgtcttgt
cccttacagcccgacgatttgcactatcccgccacgcattggacgatggagagggtatca
aagaggctgcgacgtgaaggagatttgttttctttggtgccagcgattcctcttgtgcag
gttctaagccgaggcggaattcatgtagaccacatggcgggggacataggatga
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