Sphaerobacter thermophilus: Sthe_0703
Help
Entry
Sthe_0703 CDS
T01128
Name
(GenBank) RNA binding metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sti
Sphaerobacter thermophilus
Pathway
sti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sthe_0703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sti03019
]
Sthe_0703
Messenger RNA biogenesis [BR:
sti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Sthe_0703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_2
KhpA-B_KH
OmpH
YfbR-like
Motif
Other DBs
NCBI-ProteinID:
ACZ38140
UniProt:
D1C1M3
LinkDB
All DBs
Position
1:775721..777253
Genome browser
AA seq
510 aa
AA seq
DB search
MLTEILVLLAALVVGILAAVATHLYLRSTAMSKVHQAEAEVQRRLDEAEARRREMILEAK
DEAIRLRDELEREYNQRRKELERIERRLQQKEEQLDRRLEGLERRERRAQARERELEEAR
EKLQDIEAERRAELERVAQLTTDEARSLILEQTEREMREQMNRMVREMEAEARAEAQRRA
QNILATAIQRIASDYVAETTVSVVSLPSDDMKGRIIGREGRNIRALEQATGVDLIVDDTP
EAVTLSSFDPVRREIARRALTKLIQDGRIHPARIEEVVNKTRQEVEQIIREEGERVALEA
NVQGLHPDLIKLLGRLKYRTSYGQNVLQHSLEVSLIAGALAAELGADVNVCKTAALLHDI
GKAVDHEVDGPHALIGADIARRLGRSAKIVHAIAAHHGEEEPQTVEAFIVATADAISGAR
PGARREMVEAYIKRLEALEGVANSFQGVEKAYAIQAGREVRILVQPDKVDDLGAMRLARD
IVKKIQESLEYPGQIKVTVIRETRAVEYAR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgaaatcctggtcctcctcgcggcgctcgtcgttggcatcctcgccgcagtc
gcgacgcacctctacctgcgctcgaccgcgatgtcgaaggtgcatcaggctgaggcagag
gtccagcgacgactcgacgaggcagaggcccggcgccgggagatgatcctcgaggccaag
gacgaagcaatccgtctgagggatgagctggagcgggagtacaaccaacgccgcaaggag
ttggagcgtatcgagcgcaggctccagcagaaagaagagcaactcgaccggcgactggaa
gggctcgagcggcgtgagcgccgggcacaggcgcgagagcgcgagctcgaagaggcgcga
gagaagctgcaggacatcgaagcggagcgccgagccgagctggagcgcgtcgcgcaactg
acgacggacgaagcgcgcagcttgatcctcgagcagaccgagcgcgagatgcgcgagcag
atgaaccggatggttcgcgagatggaagccgaggcccgggcggaagcccagcggcgcgcg
cagaacatcctcgccactgcaatccagcgcatcgcgtccgactacgtagccgaaaccacc
gtctccgtcgtctcccttccaagcgacgacatgaagggtcgcatcatcgggcgtgagggt
cgcaacatccgcgcgctcgaacaggccaccggtgtcgatctcatcgtcgacgacacgccg
gaggccgtcacgctctcatccttcgatccagtgcggcgtgagatcgcgcgccgtgccctg
accaaactcatccaggacggccgcatccacccggcgcgcatcgaagaggtcgtcaacaag
acgcgccaagaggtggagcagatcatccgcgaagagggggagcgggtggccctggaggcc
aacgtgcagggcttgcatcccgatctgatcaagctcctgggtcgcctgaagtaccgcaca
agctacggacagaacgttctgcagcactcgcttgaagtatccctaatcgctggtgcgttg
gccgccgagctgggtgccgacgtcaacgtgtgcaagacggcggctttgctccatgacatc
ggtaaggcagtcgaccatgaggtcgacggaccccacgcactgatcggcgccgacatcgcc
cgccgtctggggcggtcggcaaagatcgtgcacgcgatcgccgctcaccacggtgaggag
gagccgcagaccgtcgaggcattcatcgtcgccacggcggacgccatcagcggcgcgcgc
cccggtgcgcggcgtgagatggttgaggcatacatcaagcgactggaggcgctggagggg
gtggccaactccttccagggggtcgagaaggcctatgccatccaggccgggcgcgaggtc
cgtatcctggtccagccggacaaggtcgacgacctcggtgcgatgcgcctggcacgcgac
atcgtcaagaagatccaggagagcctggagtaccccggtcagatcaaggtcacggtcatt
cgggagacgcgcgccgtcgagtacgcgcgttga
DBGET
integrated database retrieval system
