Sphaerodactylus townsendi (Townsend's least gecko): 125427142
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Entry
125427142 CDS
T08213
Symbol
NRDE2
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125427142 (NRDE2)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125427142 (NRDE2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_14
TPR_19
TPR_8
DUF4718
TPR_12
TPR_2
Motif
Other DBs
NCBI-GeneID:
125427142
NCBI-ProteinID:
XP_048342184
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Position
LG02:complement(152241781..152273262)
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AA seq
1151 aa
AA seq
DB search
MALFPAFADAPKPGKTPANENEDPKRELNWLINSSFRNEDALRVHQHSLEVTDLASEKSP
LFQSQLELSGESEAGESFQKPNKKRKKKKHHHKKVKKRSKREYCTGDSESDIEDGEGGRN
KGNEGVESNLGDKTSDVISHSIWLDDVQALTAELFRTDKKPDPANWQYKSLYRGNIARYK
RRGDFCLGLDQKRQHIIWENSTAEKKRSHRRPERYYTKDGLKLVNVDSIPVRSKSQASPS
CSGSWIPVSQVDTDDVPATSSVNPLGIYDPLTTLWLQGKGPPENDASKQEEPQVICENGN
SGLRAKVEEYNRKVREDPTDVKMWMDFVSFQDELMKAPSCYSISDGEQEKRKRSFRLVLE
KKLAILEKAVESNPNNVDLKLARLKLCTEFWEPSAVIKEWQKLVFLHPNNPALWQKYLLF
CQSQYSTFVISKVHSLYGKCLSTLSAVLDGSMVSHPALPGTEEAMLAIYLQQCHFLRQAG
HSEKAVSLFQALMDFTFFKPDNLKDLPTRGQVEFFEPFWDSGEPRIGERGAKGWKAWMHQ
QEKGGWIVINPPDEEEEDLEEEQEIKDKSLPKWQNWLHVERSRERRHWLPWRPDKTKKQA
EEDCEDPERQVLFDDLGPSLIRISSRDLQFQLLCSFLQFLGVPCGCRLLPSFIYMAMDEN
DIFDHGQHKQSPLSSFDLPLSGVSCIGQMDSIAQGRKLIGHSKEGEEFIQNFFHTMLPLF
SGEEKSKLSNYWLQYEISKVIQCLKTGNKKKLKSQGKKSKKLAKNLLKAHENRNNLSLWQ
LYAYLEWLLGNIEEARKVFDTALSMGGTAGPSNPQLCAVSLLYAELEAELLESLEGALES
RATHILTRLTEKGPYVPYGGQILPVSILKARKTYEHLLQDYLNKNSAPDPEQTIISRHLI
SLVGCYALFQYITLGINAAVLICRQACERLKGERLGSHQTFTTAVEALTLMHTSLLCYHM
KTSVYPLRPLREALLEALKVYPSNQSLWRAYIQVQSKSHDASQARRFFDSMTRSTKSLEP
WLFAIQAELMRKKLVESIQRVATGDVYATIPETGLTNRIKALFERAIETENGAYCPLLWR
LYIHFMISLGNKEKGKGLFYRALQNCPWTKVLYMDAIEYFPDMLQEIIDLMTEKELRVRA
PIEELELLLED
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggctctttttcccgcgtttgcggacgccccgaagcccgggaagacgccggccaatgaa
aacgaggaccccaaaagagaattgaactggcttatcaactcaagcttccgtaatgaagat
gcattgagagttcaccagcactctttagaggtcacagaccttgcctcagagaaatcccca
ctgttccaaagccaattggaactatcaggagaaagtgaagccggtgaaagtttccaaaaa
ccaaacaagaaaagaaagaaaaagaagcaccatcacaaaaaagttaaaaaaagaagtaag
agggaatactgcaccggtgattcagaatcagacattgaggatggagaaggtggcagaaac
aaaggaaacgaaggagtagaatcaaatttaggagacaagacttcagatgtgatcagtcac
tcaatttggcttgatgatgttcaggcactgacagcagaattgttcagaacagataagaag
ccagatccagcaaactggcagtacaagtccctgtacagaggaaacattgcaaggtacaag
aggagaggtgacttctgccttggccttgatcagaagaggcaacatataatttgggaaaat
tcgacagcagagaaaaagcgatcccacaggcggcctgaacgctactacacaaaagatggc
ctgaagctcgtgaatgtggatagcattccagttcgtagcaaaagtcaggcttccccatct
tgttcaggttcttggattccagtttcacaggtggacacagatgatgttcctgctacaagc
tccgtaaaccctcttgggatttatgatccactgaccacattatggctacaaggaaagggt
ccacctgagaacgatgcatcgaagcaggaggagccacaagtgatctgtgagaatgggaac
tctggcctgagggcaaaagtggaagaatataacaggaaagtcagagaggaccctacagac
gtcaaaatgtggatggattttgtttcttttcaggatgaactcatgaaagctcccagctgt
tactctatcagtgacggagaacaagaaaagagaaagaggtcgttcaggctagtcctagag
aagaagctggctatcctggagaaagctgtggagagcaaccccaacaacgtcgacctaaag
ttggcccggctgaagctttgcacagagttttgggagccttcggctgtcatcaaggaatgg
cagaaattggttttcttgcatcccaataacccagctctgtggcagaaatacctcttgttt
tgccagagtcagtacagcaccttcgtcatctccaaagtccacagcctgtatggaaaatgc
ttgagcaccttgtcagcagtgctggatggcagtatggtatctcaccctgcactgcctggc
acagaagaagctatgctagccatctaccttcagcagtgccattttctgaggcaagctggc
cattcagagaaagctgtgtctttgttccaagccctgatggactttaccttctttaaacct
gacaatttgaaggacttgccaacaagaggacaggtggagttctttgaaccattttgggac
agtggcgagccacggattggagagagaggagcaaagggctggaaggcctggatgcatcaa
caagaaaaagggggctggattgtcatcaaccctcccgatgaagaagaggaagacctggag
gaagaacaggaaataaaggataaatctctgcccaaatggcaaaattggcttcatgtagaa
cgttcccgggaaagaaggcactggttgccctggaggcctgacaaaaccaagaagcaggca
gaagaagactgtgaagatccagagaggcaggttttgtttgatgatctgggtccatcctta
ataagaatttccagccgggatcttcagttccaattgctgtgctcatttttgcagttctta
ggagttccgtgtgggtgccgactcctcccttccttcatctacatggcaatggatgagaat
gacatatttgaccatgggcagcacaagcaaagccctctgagttcctttgacttgcccctt
tctggagtcagttgtattggtcagatggactcaattgcccaaggaagaaagctcattggc
cactctaaggaaggggaggagttcatacagaatttctttcatacgatgttgcctctcttc
tcaggagaggaaaaatctaaactttccaactattggcttcagtatgaaatttctaaggtc
attcagtgtctgaaaacaggaaataaaaagaaactcaaatctcaaggcaagaagagcaaa
aagctggccaaaaatcttctgaaggcacacgagaacaggaacaacctttccctttggcag
ttatatgcctatctggaatggttacttggcaatatagaagaggctagaaaagttttcgat
acagctttgagcatgggaggaactgctggacccagcaatccccagttgtgtgcagtcagc
ctgctctatgctgaactggaagcagagttgctggaaagtctggaaggtgctctggaatca
cgtgccactcacatattgaccagattaacagaaaaggggccttacgtgccgtacggtgga
cagatattgccagtgagcattctgaaagcacggaagacgtatgagcatttgctgcaagat
tacttgaacaaaaactctgctcctgatccagagcagaccatcatttccaggcacctaatt
agcttggttggttgttatgcccttttccagtatataactcttgggatcaatgctgctgtc
ttgatatgcaggcaagcttgtgagagacttaaaggtgagcggcttggtagtcatcagacc
ttcaccacagctgttgaagccctgacgctgatgcacacgagtctgctttgttaccacatg
aaaacaagcgtgtatcctttgagaccccttcgagaagcgctgttggaggcgttgaaggtg
tatcctagcaaccagtctctttggagggcatatatccaggtccaaagcaagtcccacgat
gcaagccaagcacggcggttttttgacagcatgacaaggtctacaaagtctctggagcca
tggctatttgccatccaagcagaactgatgaggaagaagctggtagaaagcatccagagg
gtagccactggagacgtgtatgcaacaattcctgaaactggattaacaaatcgaatcaaa
gctttgtttgaacgggccatcgagactgaaaatggtgcttattgtcccttgctgtggagg
ctatacatacactttatgatttctttggggaataaggaaaaagggaaaggactgttctac
agagcgctgcaaaactgcccctggacaaaggtattgtacatggatgccatagaatatttt
ccagatatgctgcaagagattattgatcttatgactgagaaagagctgagagtacgggca
cccattgaagaactggagctgttgcttgaagactga
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