Sphaerodactylus townsendi (Townsend's least gecko): 125431532
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Entry
125431532 CDS
T08213
Name
(RefSeq) E3 SUMO-protein ligase RanBP2-like isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03013
Nucleocytoplasmic transport
stow03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125431532
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125431532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125431532
03110 Chaperones and folding catalysts [BR:
stow03110
]
125431532
04121 Ubiquitin system [BR:
stow04121
]
125431532
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125431532
Chaperones and folding catalysts [BR:
stow03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
125431532
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
125431532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
zf-RanBP
WH1
TPR_14
TPR_1
TPR_16
TPR_2
TPR_8
DUF2383
Motif
Other DBs
NCBI-GeneID:
125431532
NCBI-ProteinID:
XP_048350363
LinkDB
All DBs
Position
LG04:100671033..100709018
Genome browser
AA seq
3011 aa
AA seq
DB search
MMRRSRAEVDRYVSSLLASAPSPREKSMKGFFFAKLYYEAKEYDIAKRYISSYLSVQERD
PKAHRFLGQLCEAEDNIEKAIGCYKRSVELNPTQKDLVLKIAELLCSTDIIDGRAKYWVD
RATKLFPGSPSIFRLKERLLDCSGEDGWNQLFDLIQSELYARPDDIYVNIRLVKLYVSNK
RLRDAVAHCREAERNNFLQSSLEWCLCVVQTLKEYLECIKNSESDKANWKRTHRDLLLAY
SNLVAMMLSNRDVKESRESLESFDHTLYSVKQHVTRDDELSVTFLEMRGHFYMHAGTLLL
KMAQQSEVQWRAVYELAALCYLIAFQVPRPKAKLIKGDQAEQAKLETLACDRQSQSGHML
LNLCHGKQDFFKEIVESFANKSGQSVLFDALFGTDACRKSSLLGTDDIRNVGVQAPENME
LTRYDIGAIRLHSGSLQHLTWLGLQWRSMSTLQAIRKWLKQIFHLPQETSRLETNAPESV
CILDLEVFLLGVIFASHLQSQETEKYNTLYTVYQPQFLPLPVCKQLCTDRQRDWWDAVYN
LVHKRAVPGTAAKMRLRVQHEISNLRALGKHGLQPALIIHWAKSLLKTGCSLNSFYDQRE
YIGRSVYYWKKVLPMLETIKKKKSIPEPVNPLFKHFHSEDIQASHVEGYQEEAHIAFAIL
DAVDGKTDDAMQAFEAIKNVVSYWNLALIFQRKAEEMDNDGMSPEEQEECRNCLKKSRDY
LIKIIDESCTDTSVMEKLPVSVETVKEMLEGVLQELGDNGEERSSALNNDLNHPAEMEIK
HSTPSPTKFSLSPSKSYKFSPKTPPRWAEDQKSLLQMLCQQVESIKHEMQELKLNNSNSN
ISHRWPAESYPTETMSDGYQGAQNFHGAPLTVATTDPSVYYNPSPASQYLLRTAATNATP
TKAPVCTMNRLTPQQHIYTYQQPMHTPPLQNTSACMFSQDMYSTPLRFDSPSTGILSPRG
NEGYYNYGVLPTNTNPPLPEPGYFTKPSAAPPVPRSAESKVTEFGKPNFGQPIPAEGAKP
PSLIGPAQSSQSTTFKFNSNFKSNDGDFTFSSPQVGAQPHSAPYNNSDSLLGLLTSDKPI
KEDRYIGQKLAGEHAAGQRSIFSFGIKNTSGISFVEKMGQNQPKPCGFIKGDGFSFQDLG
KPMFGTPNSDVVNRSHETDGGSTHGVEEEEDGPHFEPVVPLPDKIEVKTGEEDEEEIFCN
RAKLFRFDAECREWKERGVGNVKILRHKVTGKIRLLMRREQVLKICANHYISPEMTLIPN
AGSDKSFVWHALDYADELPKPEQLAIRFKTPEEAMLFKSKFQEAQKSLKDPGPIVSEQAT
QNIGPREITHDAKDSSKPDPGFHFKSGTSSVSGGSQGSGSNMNNTAKNANTKSTFTVSST
GSTPASFSSDKGVLATHAAHGFGDRFALKKDEWDCNVCLTRNKESAQKCVACESPKPFDK
TSLAVTSQTEPALVFKPNAENAQCTFGPLPAKTEKQWECQVCSVRNEASASHCTVCKIPS
GTNAPAFGAQAKFNSGQTDAPKVQQSDFGAAFFKKEGEWDCSTCLVRNKAFSSTCEACQA
PNPSSRAPSLPVNTAPPTFGFKSKLSEPSKGPLETGFKSNFSEQGFKFGHSTEQEKSSSF
MFQIPSSVETKPMKSGFNFSMPAPAGGFKFGIQEPSKDVAKDEQNKEGNLVEKNSKGGGG
EKSQDSSSKESSSLVFGQHSSTFTFADLAKTSAGEGFQFGTKDPHFKGFTGAGEKLFSSQ
AKSPSKASSSGDFGKEEDAYKTEDIDDIHFDPVVQMPDKVELVTGEEDETVLYSQRVKLF
RFDAETSQWKERGVGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKSLSGSDK
AWMWLASDFSDGDAKLEQLAAKFKTSEQAEEFKHKFEECQRLLLDIPLQTPHKLVDTGKT
AELIQKAEEMKSGLKDLKTFLTDDKTKLADEENRNSVSAASPSDLIIKPHADSTGPTLEW
DNYDLRGEALEDGTNNSVYALPRASSPVRKNLFRFGESTAGFNFSFKSALSPSKSPSKHN
QSRTSVGTDEESDVTQEDERDAQYFEPVVPLPDLVEVTSGEENEQVVFSHRAKLYRYDKD
ANQWKERGIGDLKILQNYDTKLVRIVMRRDQVLKLCANHRITPDMNIQQMKGTERAWVWT
ACDFADGERKVELLAVRFKLQDVAESFRQIFEEARCAQEKDTLITPLCSRTNTPKESPCG
KMAVAVLEEITRERTDLNQKEEIVDETVETSEVPSASEVPTKAVVSPPKFVFGSESVKSI
FNNEKSKPFTFGNTSATGSLFGFSFNSPKSPNDSSGCPTTAQKEPGHTFGSVKCRTAGRR
EDSGWKHSYGKEVQMATSKMDELANFSFKIPEKGLNFSLFKSNPMAFWTSTSPTPPGSKA
EIKKEPDDVTSDDVLIVYELTPTPEQRALANSLKLPPTFFCYKNKLDYLSSGDDDDDDED
YETAVRNLNGKLYPDEPKESRPKETEAGITGENEAESGSECVLVWEKKPTPEEKAKAEML
KLPPTFLCGISSDTEEDDGNLEDFQRELRKIQETKEAQTGEVTSSVEIRTTEEGAPVAAT
SGNEELHSATESIQTMQALLGRDDTPVDLSKKKENDLNSAASTNQENKPFSFDLGNIHSV
SFADLASNNSGDFAFGCKDKNFKWADTGATVFGAQPASKGENEEDGSDEEIVHSDDIHFE
PIISLPEVEVKSGEEDEEILFKERSKLYRWDREVNQWKERGVGEIKILFHTQKKYYRVLM
RRDQVLKVCANHVITKAMELKPLNTSNHAMVWTATDYADGEAKVEQLAVRFKSQELADCF
KRRFEECQKNLSELQKGHVSLAAELSKETNPVVYLEVSADNEPLGRITIELFSNIVPRTA
ENFRTLCTGEKGFGFRNSIFHRIIPDFICQGGDITNQDGSGGRSIYGVAFEDENFEVKHT
GPGLLSMANRGRDTNNSQFFITLKMAEHLDFKHVVFGFVKDGMDVVKQMESFGSPKGTVS
KRIVITDCGQI
NT seq
9036 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggcgcagcagggcggaggtggaccgctacgtctcgtcgctgctggcttcggcc
ccttctcccagggagaaatccatgaagggattcttttttgctaaactatactatgaagca
aaggaatatgacattgctaaaaggtacatatcttcatatctcagtgtccaagaaagagac
cccaaggcacatagatttttggggcagctctgtgaagctgaagataatatagagaaagct
attgggtgttacaagcgttcagtggaactgaatccaacacagaaagatcttgtgttgaag
attgcagagctgttatgcagcactgatattattgatggaagagcaaaatactgggtcgac
agagcgaccaaactgtttcctggaagcccttccattttccgattgaaggagcgtctgttg
gattgcagtggggaagatggttggaatcagctttttgatttgattcagtctgaattgtat
gccagaccagatgacatatatgttaacatcagactagtaaagctatacgtgtccaataaa
agactaagggatgctgtggcacattgtcgggaagcagagagaaataattttttacagtca
agcttggaatggtgcttgtgtgttgtacagactcttaaggaatatctggaatgtataaaa
aattctgagtctgataaagctaattggaaaagaacccaccgggatctattgttggcatac
tctaatctggttgcaatgatgctttcaaacagagatgtgaaagagagcagagaatccctc
gaaagctttgatcatacactttattcagtgaaacaacatgtaaccagggatgatgagctg
tctgtaaccttcctggaaatgaggggccacttctacatgcatgctggaactctgctctta
aaaatggcccagcaaagtgaagtgcagtggagagcagtttatgaattggcagcattgtgt
taccttatagcttttcaggttcccagaccaaaggcaaaactaataaaaggagatcaagct
gaacaagcgaagttggaaacgttagcttgcgaccgacaaagccaatctggccacatgctg
ctaaacctttgtcatggcaagcaagacttcttcaaggagattgttgaatcatttgcaaac
aagagtgggcagtctgtcttatttgatgcactgtttgggactgacgcttgtagaaagagt
tccctccttggtactgatgatatccgaaatgttggtgtacaagcaccagaaaacatggag
ctaacgagatatgatattggtgccattcggttgcacagtggcagtctccagcaccttaca
tggcttggtctgcagtggagatccatgtcaactttgcaagccattcgcaagtggctaaag
cagatttttcatttgcctcaggaaacatcaaggcttgagaccaatgctcctgaatcagtt
tgcatactggacctggaagtatttctacttggagtgatatttgccagccatttgcagtcc
caggaaaccgagaagtataacactctgtacactgtataccagcctcagtttctgccgttg
cctgtatgcaaacaactttgtactgacaggcagagagattggtgggatgctgtttataac
cttgttcacaaacgggctgtgcctgggacagcagcaaaaatgaggcttagagtccagcat
gaaataagcaacctaagagccttgggaaaacatggacttcagccagctctaattatccac
tgggcaaaaagtcttcttaaaacgggctgtagccttaattctttttatgaccaaagggaa
tacattggacgcagtgtgtattattggaaaaaagttttgccaatgcttgagacaatcaag
aaaaagaaaagcattcctgagcctgttaatcctttgttcaagcattttcacagtgaagat
attcaggcttcccacgttgaaggatatcaagaggaggcacacatagcatttgctatattg
gacgctgttgatggaaaaacagatgatgctatgcaagcatttgaagctattaaaaacgtt
gtctcatactggaatcttgccctgattttccagaggaaagctgaagagatggacaatgat
ggtatgtcaccagaagaacaagaagaatgcaggaattgtctaaagaaaagcagagactat
ctcataaagataattgatgaaagctgcacagatacctcagtaatggaaaagttacctgta
tctgtagaaacggttaaggagatgttagaaggggtattgcaagaacttggggacaacggt
gaagaaaggagttctgccttaaacaatgacttaaaccatccagctgaaatggaaattaaa
cattctacaccatcacccacaaaattctcactgtctccaagtaaaagctacaagttctct
cccaaaactcctcctcgctgggcagaggaccaaaaatctctacttcagatgctctgtcag
caagtagaatctatcaagcacgagatgcaagaactgaaacttaataattcaaactcaaac
atttcccatcggtggcctgctgaaagctatccaacagagacaatgtcagatggctatcaa
ggagcacagaactttcatggagcaccattaactgttgctacaacagatccatcggtctac
tacaacccatctccagcttcccagtaccttctacgaacagcagccactaatgcgactccc
acaaaggctcctgtctgtacgatgaatagactgacacctcagcaacatatatacacctat
caacagccgatgcatactcctccactacagaatacttctgcttgtatgttttcacaagac
atgtatagtactccactgcgttttgattctccttcaactggaattctgtctcctcgtggt
aatgaaggctattacaattatggtgttctgccaacaaatacgaaccccccactccctgag
ccaggctacttcaccaaaccttcagcagcgcctccagttccaagatctgcagagtcaaag
gtgacagagtttggaaagcctaactttggacagcctataccagcagagggagcaaagcca
ccttcgttgataggcccagctcagtctagtcaatccactacattcaaatttaattccaat
ttcaaatctaatgatggagattttactttttcatcacctcaggttggagcgcaaccgcac
agtgcaccgtataataacagcgatagtcttttgggtcttctgacatcagataaacctata
aaagaagatcgctatataggacaaaagcttgctggtgaacatgccgctgggcagcgcagt
atcttcagctttggtatcaagaatacttcaggcatttcattcgtagaaaaaatgggccag
aaccaacccaaaccctgtggtttcattaagggagatggattcagcttccaagatcttggc
aagcctatgtttggtactccaaattcagatgtagtgaacagaagtcatgaaacagatggc
ggaagtacccatggtgttgaagaagaagaagatgggcctcattttgaacctgttgtgcca
ctgcctgacaagattgaggtaaaaacaggtgaggaagatgaggaggaaattttctgcaac
agagctaaactctttcgttttgatgctgaatgcagagagtggaaagagcggggcgttggc
aatgtgaagattctgaggcataaagtcactggcaaaatccgattgctgatgaggcgagag
caagtgttgaaaatctgtgcaaatcactacataagccctgaaatgactttgataccaaat
gctggttcagacaaatcatttgtttggcatgctttagattacgcagatgagttgccgaaa
cctgaacaactggcaatcagatttaaaaccccagaagaagctatgctattcaagagcaaa
tttcaggaggctcagaaaagtttgaaggaccctggaccgattgttagtgaacaggctact
caaaatattgggccaagagaaataactcacgacgcaaaggattctagtaaacctgatcct
gggttccattttaagagcggtacatcctctgtcagcggtggcagccaaggttcaggctct
aatatgaacaatacagcaaaaaatgctaataccaaaagtacatttacagtttcatcaact
gggtctacacctgcctccttttcctctgacaagggagttctggcaacacacgcagcgcat
ggattcggtgaccggtttgcactaaagaaagatgagtgggactgcaacgtctgcctgact
agaaataaagaaagtgcacagaaatgtgtagcatgcgagagtccaaagccattcgataaa
acatcgctagctgtgacttctcagacagaacctgctttagttttcaaaccgaatgctgaa
aatgcacagtgtacctttggacctttgcctgctaagacagaaaagcagtgggaatgccag
gtctgctctgtaagaaacgaagccagtgcatcgcattgtaccgtctgcaagattcccagt
ggaactaatgcaccagcctttggtgctcaagcaaagttcaactctggccaaacagatgct
ccaaaggttcaacagagtgactttggggctgctttctttaaaaaggaaggtgaatgggac
tgcagtacatgcttggtacgaaataaagctttttcttcaacgtgtgaagcttgtcaggct
ccaaatccatccagtcgtgctccatccctgcctgttaatactgcgcctcctacgtttggc
ttcaaaagcaagttatcagaacccagcaaaggacctctggagaccggtttcaagagcaac
ttttcagaacaaggtttcaaatttggccactctacagagcaagagaaatcttcttccttc
atgtttcaaattccttctagtgtagaaactaagccgatgaagagtggatttaatttttca
atgcctgctcctgcgggtggattcaaatttgggatacaagaacctagcaaagatgttgca
aaagatgaacagaataaagaaggtaacctggttgaaaagaactccaagggaggcggtggt
gaaaaatctcaggattcgtctagcaaagagagcagcagtttagtttttggccaacatagc
agcactttcacttttgcagatcttgcaaaaacatcagctggcgaaggatttcagtttggt
acaaaagacccacattttaaagggtttacaggtgcaggcgaaaaactcttttcttctcag
gctaaatctccttccaaagcaagttcctctggcgattttggcaaggaggaggatgcatat
aaaacagaggacattgatgacattcattttgacccggttgtccagatgcctgacaaagtg
gaacttgtcactggagaagaggatgagaccgtgttatactcacaaagggtgaaattgttt
cggtttgatgcagagacgagccagtggaaagaacggggtgtcggcaacttgaaaattctg
aagaatgaagttaatggcaagctgcggatgctcatgcgacgtgaacaggtgctgaaggtc
tgtgcaaaccactggatcacaaccaccatgaacctgaagtccctctctggctcagacaaa
gcgtggatgtggctagccagtgacttttctgatggtgatgcaaagttggagcaattggca
gctaaattcaaaacttcagagcaggctgaggaattcaaacataaatttgaagaatgtcaa
aggctgctgctggacataccactccaaaccccacacaaacttgtggacactgggaaaaca
gccgagctcatccagaaagcagaagaaatgaaaagtggattgaaagatctcaaaaccttt
ctgacagatgacaaaactaagcttgcagatgaagaaaacaggaattctgtttctgctgct
agcccttctgacttgattataaagccacatgctgacagcactggacctacattagaatgg
gacaactatgacttgcgtggggaagcactggaagatggcaccaataattcagtttatgca
ttgcctcgggccagtagccctgtgaggaaaaatctgtttcggtttggcgagtctacggca
ggatttaacttcagcttcaaatctgctctgagtccttcaaagtctccttccaagcacaac
caaagcaggacttcagtaggcacagatgaagagtctgatgtaacccaagaggatgaaaga
gatgctcagtactttgaaccagtggtaccgttacctgaccttgtagaagtaacaagtggt
gaagaaaacgagcaagtggtcttcagtcaccgagccaagctctatagatacgataaagat
gccaatcagtggaaggagagaggtatcggggatctgaagatcttgcagaattacgacact
aagctagttcgcatagtcatgaggagggaccaggtattaaagctctgtgccaatcacaga
ataaccccagacatgaacatccagcaaatgaaggggacagagagagcatgggtgtggact
gcgtgtgactttgctgacggggaaagaaaagtggagctcttggctgtgcgatttaagttg
caagatgttgcggagtcctttaggcagatttttgaggaagcaagatgtgctcaagaaaaa
gacactttaattacacctctgtgttcgcgcacgaatactccaaaagaatcgccatgtgga
aaaatggctgttgctgtattggaagaaatcacccgggagagaacggatttaaaccaaaag
gaagagatagttgacgaaacggtcgaaacatcagaagtgcccagtgcttctgaggtgcca
acaaaagcagtggtttcgccacccaaatttgtgttcggctcagaatccgtcaaaagtatt
tttaataatgagaagtcgaagcctttcacatttggaaacacgtcagcaacaggatctttg
tttggtttcagttttaattctcccaagagcccgaatgatagttcaggatgtccaactaca
gcacagaaagaaccagggcacacatttggcagtgtgaaatgcagaactgccgggcgtcgg
gaagatagtggctggaagcactcttatggcaaagaagttcagatggcgacttctaaaatg
gatgaacttgctaacttttcatttaaaataccagaaaaagggttaaactttagccttttt
aagtctaacccaatggccttttggaccagcacatctcccactccacctggtagtaaagct
gagattaagaaggaaccggatgatgttacttcagatgatgtattgattgtatatgagttg
acacccactcctgaacaaagagctcttgcaaactcactcaaattaccaccaacattcttc
tgctacaagaacaagcttgactatctgagtagtggggatgatgatgatgatgatgaggac
tatgaaacagcagtgagaaatcttaatggaaagttatatcctgatgaacctaaagaatca
aggccaaaggaaactgaagcaggtatcacaggagaaaatgaggcagaaagtgggagtgag
tgtgttctagtctgggaaaagaaaccgactcctgaagaaaaggctaaagcagagatgctg
aagcttcctccaacatttctttgtggcattagcagtgacactgaagaagacgatggcaac
ctggaagacttccaaagagagcttagaaaaattcaagaaactaaagaagctcaaacaggt
gaagtcacaagttcagttgaaattaggaccactgaggaaggagcacctgttgcagccacc
agtggaaatgaagaattgcactctgctacagaatctatacaaacgatgcaggctttattg
ggaagagatgatacacctgttgatttgtcaaagaaaaaagaaaatgacttaaattctgca
gcatctaccaaccaggaaaacaagcctttctcttttgaccttggcaacatacatagtgtg
tcctttgctgatctggcttcaaataattctggagattttgcttttggctgtaaagacaaa
aacttcaaatgggcagatacaggtgcaactgtatttggagctcagccagcttctaaagga
gaaaatgaagaagatgggagtgatgaagaaattgtacatagtgatgatattcattttgaa
ccaataatatctttgccagaggttgaggtgaaatctggagaagaagatgaagaaattctt
ttcaaagagaggtcaaaactctacagatgggatagagaagtcaaccagtggaaagaacgt
ggtgtgggagaaataaaaatcttgttccatacacagaagaaatactatagagttttaatg
agaagggaccaagttcttaaagtttgtgcaaaccatgtaatcacaaaagcaatggaatta
aaacccttgaatacctcaaaccacgctatggtttggactgctacagattatgcggatggt
gaagctaaagtagaacagcttgcagtccgatttaaaagtcaagaactggctgattgcttc
aagaggagatttgaagagtgtcaaaaaaacttatcagagttgcagaaaggccatgtatcc
ctagcagcagaactgtcaaaggaaactaaccctgtggtctatcttgaagtttctgctgac
aacgaacctctaggtcgtataactatagaattgttttcaaatattgttcctcgaaccgca
gagaactttagaacactgtgcacaggagaaaaaggatttggtttcagaaactccatattt
cacagaataattccagattttatctgtcagggaggtgacatcactaaccaggatggcagc
gggggacgatctatttatggagttgcatttgaggatgaaaacttcgaagtaaagcacact
ggccctggtttactgtccatggcaaatcgtggcagggacaccaacaattctcagtttttt
attactctaaaaatggcagagcatttggactttaagcatgttgtctttgggtttgtgaag
gacggcatggatgttgtgaagcaaatggaatcttttggcagtcctaagggaacagtgtca
aaaagaattgtgattacagactgtgggcaaatataa
DBGET
integrated database retrieval system
