Sphaerodactylus townsendi (Townsend's least gecko): 125433887
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Entry
125433887 CDS
T08213
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stow03036
]
125433887 (CHD6)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125433887 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
CHDCT2
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
125433887
NCBI-ProteinID:
XP_048354765
LinkDB
All DBs
Position
LG05:100340557..100480211
Genome browser
AA seq
2751 aa
AA seq
DB search
MKIQKKEKQLAHFKVLTHSPMSDASITFECKPQSPFVSSPDQEDLHDLVTISDLASVSLV
QKDQQNVIPDEIVQNMVTSHNGVEDDGGGGTGVKKKRKKKEAGQQELCGERDAKPKRKRE
PKEPKEPKKPKKPKEPKPEGIKKPRKPREPKVPKEPKEKKSNLDSPPKARPKKPSTEQGP
TPVEKKKKGKRKHDTPVENLELDQSLLSLSGQSPEESAELTDSQKRRSGRQVKRRKYNED
LDFKVVDDDGETIAVLGAGRASALSASTLAWQAEEPPEDDANIIERILASRMVQKETHPG
GLAYELEEFYVKYRNFSYLHCKWATMEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDL
FNPDYVEVDRILEVAHTKDADTGEEVIHYLVKWCSLPYEESTWELEEDVDPGKIKEFESL
QIQPEIKPLERPASESWQKLGKSRDYKNNNELREYQLEGMNWLLFNWYNRKNCILADEMG
LGKTIQSITFLSEIFLMGLRGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMI
QQYEMVYRDAQGSPLQGLFKFHVVITTFEMILADCPELKKIQWRCVIIDEAHRLKNRNCK
LLEGLKLMSLEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVK
KLQSLLKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFTFLSKGANQH
NMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAFDFQLQAMIQAAGKLVLID
KLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPD
SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT
RNSYEREMFDKASLKLGLDKAVLQDINRKGSNNGVQQLSKMEVEDLLRKGAYGALMDEED
EGSKFCEEDIDQILQRRTQTITIQTEGKGSTFSKASFVASGNRTDISLDDPNFWQKWAKI
AELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRLNEKT
RRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDE
KIKSFIWDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKSQMLLPEIKNADWLTTCNP
EIVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTSAKDLDVMLPDIDY
MEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQSVIDG
VQDAPEKVNTDKDEGSADKVEGLQKEEETSECSGETTEKKDDSVAAQDGSSPDKSIWPVS
SALTARLRRLVTVYQRCNRKELPPRPEIMGPCNHGYWLQEEMFRRASEVDPVNKELQKRW
TRREQADFYRTVSSFGIIYDPEKKIFDWTQFRSISRLEKKTDDSLEKYFYSFVAMCKTVC
RLPHWKDDGPADPSIYVEPITEERAARTLYRIELLRKVREQVLRCPQLHERLKLCRPSLY
LPVWWECGKHDRDLLIGTAKHGLNRTDYFIMNDPQLSFLDAYRNYAQHKRTGVIGAENFC
CHHQANSKLYCSPSYGQVEQKHESAETETMSCVKLVGTGDGLSQTENISQDGNCETFMSK
VRGMMPINYDESSLPDSLLCMMYDEKACNSEHSSLARDSPSCTDVSSNTTKMAEGKIDGD
EDLSSCDADTTRDPSYLDNLQLSSDQMESQNTTQEPLAKEAKPSEDFSAEPSEALQHMGS
PYGSSGSVPFERDGMGGVLSLGVYSPSLHNFDIKVHPEKRFMSLLHEKGLEEKSVQSQSH
SEDEEEEEEEEEEEDNLETAADSLGVFRSCLNTLDGEEDIAVAQEGQKQSSCILTSLDAF
IDGRNKELVESVSSEQAASKFDSEPGAGEDDQAECESLEEHIPALQEIQAFHHHHHHSAQ
SNTSAVQMELLKSHSVGMEADPWGDDTEGKVESPAVQPFCRNEIKREEEECENQDLEKRD
GISQNQDCYEKLSEDESKSSVFAAPEEIDELQDVRAPTIAQLLQEKTLYSFSEWPKDRVI
INRIDNICHAILKGKWPSSSQPFEIHSVMPAAVLASSTGKRNNYSETEASESSFSNGVIA
TQVQKEGFLAPTFVKDEHKHRQPYEFEVERDAKRRNLEQLVASHPHPPIVLNGWRDAAVD
LSRVPDASPGSSSPFSLSTNIPKLGTVNALQGSLGMDLSGILQAGLIHPVTGQIVNGSLR
RDDTAMRRRRGRRKNVEGIDLIFLKERCLQTGLPEDQAQTVPSNLNPDGPAISTSTQQTV
PGTNVQAEKIVPNKTLLDWLRQQSDYTLEIPSFGTNFPEKPKQRRQRCKDPSKLDINSLT
GEERVPVVHKGTGRRLGGAMAPALKELPRWLDANIEYAVAADWSDIVKLSGFLPENKFNR
ILTEPVLRDAGPRRRGRRPRSELFKAPGIVADASSGMGPLFMNGLIAGMDLVGLQNMRNM
QGIPLTGLVGFPAGFAAIPAGEDVKSTLSMLPMMLPGMAAVPQMFGVGGLLNPSLTTTCT
STTPTSLSSTTKSGMSHTEKDVEGKQSGQCAKPETFSEDKSGSSSFSDQSEPAITTSSPV
AFNPFLIPGMSSGLLYPSMFLSPGIGMALSGLQQTRHSDAANLETQKRKRKKPKGELSNP
DSETPLLSEKEHANNQNCTEQIPSVSTENQHDVPAEKEEEKEKLKEIKDTN
NT seq
8256 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacagaagaaagaaaagcagctggcacattttaaagtgctgactcattcccca
atgtctgatgcctccattaccttcgaatgcaagccacagtctccttttgtcagtagccca
gatcaggaagatctgcatgaccttgtgacaatctctgatttggccagcgtgagcctggtc
cagaaggaccagcagaatgtaatacctgatgagattgtgcagaacatggtgacttcccac
aatggggtggaggatgatggaggcgggggcaccggggtgaagaagaaaaggaagaaaaaa
gaagcggggcagcaggagctatgtggcgaaagagacgcaaaaccaaagaggaagagagag
cctaaggaaccaaaagaacccaaaaagcccaagaagccgaaggagcctaaaccagagggc
atcaaaaaaccccggaagccacgggagcccaaagtcccgaaggagcctaaagaaaagaag
agcaacttggactctccccccaaagcaaggcccaagaaacctagcacggagcaaggacca
actcctgttgagaagaagaaaaaagggaagaggaaacatgacactccagtggaaaaccta
gagctggatcagagtctcctttcgttgtctgggcagagccctgaggagtctgctgaactg
actgacagccagaagcgccgctctggacgccaagtgaagcgcaggaagtacaatgaagac
ctggatttcaaggtggtggatgatgatggagaaacaatagctgtgctgggagctggccgg
gcttctgcgctctctgcgtctaccttggcctggcaggcagaggaacctcctgaggatgat
gccaacatcattgagagaatccttgcctccagaatggtgcagaaagagactcaccctgga
ggactagcatacgaactggaggagttctatgtaaaataccgtaatttttcttacttgcac
tgtaaatgggccacaatggaggagctggagaaggatccacgtatctctcagaagataaag
cgtttccgcaacaagcaggcacagatgaagcacatttttactgagcctgatgaagacctg
tttaacccagattatgtggaagtcgacagaatcttggaggtggctcacacaaaagacgcc
gatactggggaggaggtgattcactacctggtaaagtggtgttcattgccttatgaggaa
agcacgtgggagctggaagaagatgttgacccagggaagataaaagagtttgaatctctg
caaatccaaccagagatcaaacccttggagcgccctgcttctgagtcctggcaaaagttg
ggaaagtctcgtgattataaaaacaacaacgagttacgggagtaccagttggagggaatg
aattggctgctgtttaactggtacaacaggaagaactgcatcctggctgatgaaatgggt
cttgggaagacaattcagtcaatcacattcctttctgagattttcctgatgggtcttcga
ggcccatttctcataattgctccactttcaaccatcacaaattgggagcgggagttccgc
acatggactgagatgaacgccattgtgtaccatggcagccaaatcagccgccagatgatc
cagcagtatgagatggtgtaccgagatgcacagggcagccctcttcaagggctcttcaag
ttccacgtggttatcactacctttgagatgatccttgccgactgtcctgagctgaagaaa
atccagtggcgctgtgtgatcattgatgaggcccatcggctcaaaaacaggaactgcaag
ttgctggaaggactgaagctgatgtctctggaacacaaagtgctactgactggaacaccc
ctgcagaactctgtggaggagctcttcagcctactcaacttcctggagccacagcagttc
ccatctgagactgcctttctggaggagtttggggacctcaagacagaggagcaggttaag
aagctccagtccctcctgaaacccatgatgctgcgacgtctgaaggatgatgtggagaag
aatctggcacccaaacaagagaccatcattgaggtagagctgaccaacatccagaagaaa
tattatcgggctattctggagaagaatttcaccttcctgtccaagggtgctaatcagcac
aacatgcccaacctcatcaacaccatgatggagctgcgcaaatgctgcaaccatccctac
ctcatcaatggggcagaggaaaagatcctagaagattttcgtaaaacacacagcccagat
gcttttgacttccagttgcaggcaatgatccaggcagcaggcaagctggtgctgattgat
aagctgttaccaaagctgattgcaggcgggcacaaggtgctgatcttctcccagatggtg
cgctgtctcgatatcctggaggattatctcatccagaggcgatacacgtatgagcgcatt
gatggacgagtgcgtgggaatttgcgccaggctgccattgaccgcttttgcaagccagat
tcagaccgctttgtcttcttgctctgtacgagggctggaggtctgggcatcaatctcact
gctgctgacacctgcatcatctttgactcagattggaacccccaaaatgacctgcaggcg
caggctcgctgccaccgaatagggcaaagcaaggcagtaaaagtttatcgccttatcact
aggaattcttatgagcgtgagatgtttgacaaggccagcttgaagctcggtttggacaaa
gcagtgctacaggacatcaaccgtaaaggcagcaacaatggggtccaacagctctctaag
atggaggttgaagatttgttgcgaaagggagcttatggggcactaatggatgaggaagat
gaaggctccaaattctgtgaggaagatattgatcagatcctgcaacggagaacccaaaca
atcactattcagactgagggaaagggctctacattctccaaggccagctttgttgcttct
gggaaccgaactgacatttcattggatgatcccaacttctggcagaaatgggcaaaaata
gcagagttggatacagatgcaaaaaatgaaaaggagagcctagtgattgacaggccccgt
gtccgtaagcagaccaaacactacaattcatttgaggaggatgagcttatggagttttct
gagctcgacagtgactctgatgagcggcccacacgctcacggcgtctcaatgagaaaaca
cggcgctacttgcgagcagaatgtttccgtgtggagaagaacctgcttatatttggctgg
ggacgctggaaagacatcttgactcatggccgatttaaatggcatctgaatgaaaaagac
atggaaatgatctgtcgagcactcctagtctactgtgtcaaacattataagggggatgag
aagattaaaagttttatctgggatttgattacccccacaaaagatggacagaaccaagcc
ttgcagaaccactcaggcttgtcagctccagtgccaagaggaaggaaaggaaagaaaaca
aagagccagatgctacttcctgagatcaagaatgctgactggcttaccacctgcaatcct
gagattgtcctacatgatgacagctacaaaaaacacctaaagcaacattgcaacaaggtg
ctgttgcgggtgcgaatgctgtactacttgaaggctgaagtgctgggagaggcagctgac
aaagcctttgaaggaacctctgccaaagacctggatgtcatgttgcctgacattgactac
atggagatccctgtggattggtggaatgctgaggcagataaatccctgctcattggagtt
ttcaaacatggttatgaacggtacaacgccatgcgagctgatccagccctgtgctttctt
gagaaggttggcatgccggatgagaagctgctgtctgcggaacagagtgtcattgatgga
gtgcaagatgctccagaaaaagtcaacacagacaaagatgagggcagtgcagacaaggta
gaagggctgcagaaagaggaggagacttcagagtgtagtggtgaaactactgagaagaag
gatgatagtgtggcagcccaggatggctccagcccagacaaatccatctggcctgtgtca
tctgctctgacagccagactgaggcgtcttgttactgtctatcagcgttgcaaccgtaaa
gaattgccacccagacctgaaatcatggggccttgtaaccatggctattggctgcaagag
gagatgttcaggagagccagtgaagtggatccagtgaacaaagaattgcaaaaaagatgg
accagaagagaacaagcagatttctaccgtactgtctcctcatttggaataatctatgat
ccagagaagaagatctttgactggacgcagttccggtctatttcacgtttggagaagaaa
actgatgacagcctagaaaaatatttctacagctttgttgccatgtgtaagactgtttgt
cgtttgccccactggaaggacgatggcccagcagatcccagtatctatgtggaaccaatc
acagaagaacgtgctgcaaggacattgtaccgaattgagcttctgcggaaggtccgagag
caagtgttgaggtgtccacagcttcatgaacgactcaagctttgccgtccaagtttgtat
cttcctgtgtggtgggaatgtggtaagcatgaccgggatctgctgataggtacagctaaa
catggactgaaccgcacagactatttcatcatgaacgaccctcagctgtcatttttagat
gcctacagaaattatgctcagcacaaaaggactggagttattggagcagaaaacttttgc
tgccatcatcaggcaaactcaaaactatattgttccccttcatacggtcaggtggaacaa
aagcatgaatctgcagagacagaaactatgagctgtgtcaagctagtgggcacaggtgat
ggcctctcacagacagaaaacatctctcaggatgggaactgtgaaacctttatgtctaaa
gtccgtggtatgatgcctattaactatgatgagagctctttgcctgactctctactgtgc
atgatgtatgatgagaaggcctgcaacagtgagcacagttcccttgcccgtgacagccca
agctgcacagatgtcagcagcaatactaccaaaatggcagaggggaaaatagatggagat
gaagatctttctagctgtgatgctgatactacaagagacccctcctatcttgataatttg
caactcagcagtgaccaaatggagagtcaaaatacaacacaggagcctttagccaaggaa
gcaaagccctctgaagacttttctgcagaaccctctgaagccctccagcacatgggcagt
ccatatggtagctcaggatcagtaccgtttgaaagagatggcatgggaggggtcctgagt
ttaggagtctacagtcccagtcttcacaattttgatatcaaagtccatcctgagaagagg
tttatgagcttattgcatgagaaaggcttggaggagaaatctgttcagagtcagagtcac
agtgaagatgaggaggaggaagaagaggaggaggaagaggaagataatttggagacagca
gctgactctttgggggtttttagaagctgtctaaataccttggatggggaggaagacata
gctgttgcacaagaggggcagaaacagagttcctgcattctcaccagtctagatgcattt
atagacggacggaataaggagctggttgaatccgtctccagtgagcaagcagcatctaaa
tttgatagtgagccaggggctggagaggacgaccaggctgaatgtgagagccttgaggaa
cacattccagctttgcaggagatccaggccttccaccaccaccaccatcactctgcacaa
agcaatacttcagcagttcaaatggagctcctgaagtcacattctgtgggcatggaggca
gacccctggggagatgacactgaggggaaggtggaaagtcctgctgttcaacccttctgt
aggaatgaaataaagagagaggaggaagagtgtgaaaaccaagacctagagaaaagggat
ggaatcagccaaaatcaagactgttatgagaagctttctgaagatgaaagtaagagctcc
gtgtttgctgcgcctgaagagattgatgaacttcaggatgttcgggctcccaccatagct
cagcttttacaagagaagaccctctactctttctcagaatggcctaaggatcgtgtgatc
atcaatcgaattgacaacatttgtcatgccatcttgaagggcaagtggccttcttccagc
cagccatttgaaatacacagtgtaatgcctgctgctgtgttagccagtagtactggcaaa
aggaacaattactctgagacagaagcctcagagtccagctttagcaatggagtgatagct
acacaggtccaaaaggaaggtttcttggctcccacatttgtcaaagatgaacacaagcac
cggcaaccatatgaatttgaggtggaaagagatgccaagcgacggaaccttgagcagctt
gttgcatctcatccccatcctcctattgtgttgaatggctggcgggatgctgcagtggat
ctttccagagtgcctgatgcatcaccaggaagcagctctcccttctctctaagcacaaat
atacctaaattaggaactgtgaatgccctgcaaggctctctgggcatggacttgtctggt
attcttcaggcaggattaattcatcctgtcacaggacagattgtcaatgggagtctacga
agggatgacactgctatgaggagaaggcggggaaggagaaaaaatgtggaaggaatagac
ctgatatttttgaaggagaggtgcctccagacaggactgccagaagatcaagcccagact
gttccaagcaatctgaaccctgatgggccagccatctctacctcaactcagcagacagtc
ccaggcacgaatgtccaggcagagaagattgttccaaacaagactcttctggattggctg
agacagcagtctgattacactcttgaaattcctagttttggcacaaattttccagagaag
cctaaacagaggaggcagcgttgtaaggaccccagcaaactggacataaattctctgaca
ggggaggagcgtgtgcctgtggtccataagggtacaggacgaaggttaggaggagccatg
gcaccagcactgaaggaactgccaagatggcttgatgctaacatagagtatgctgttgca
gctgactggtctgacattgttaagctttcagggtttttacctgaaaacaagttcaatcgt
attcttactgagcctgtactccgggatgctggacctcggcggagaggcagaaggccaaga
agtgaacttttcaaagctcctggcatagtagctgatgcttcttctggaatgggaccatta
ttcatgaatggacttattgctggaatggatttagtaggacttcagaatatgagaaacatg
caaggcattcctttaactgggctggttggatttcctgctggatttgcagcaatacctgct
ggtgaggatgttaaaagcactctaagtatgttgccaatgatgttgcctggcatggccgct
gtaccacaaatgtttggtgttggaggacttctcaatccatcgctgacaactacatgtact
tcaactactccaacttcattatcaagcacaactaaaagtggtatgtcacatacagaaaaa
gatgttgaaggcaaacagagtggccaatgcgcaaaaccagaaactttttctgaagacaag
tctggctctagttcgttttctgatcagtcggaacctgcaataactaccagtagtcctgta
gcttttaacccgtttcttattccaggaatgtcatctggactgctctatccctcaatgttt
ctttctcctggcattggcatggcattgtcaggtcttcagcaaaccagacactcagatgca
gcaaacctagaaacccagaagcgaaaaagaaagaaacctaaaggggaattatcaaaccca
gattcagaaactcccttgttatctgagaaggaacacgcaaacaatcaaaactgtacagaa
caaataccatctgtgtcaacagagaaccaacatgatgtaccagcagaaaaggaggaagag
aaggaaaagttaaaagaaattaaagataccaattag
DBGET
integrated database retrieval system
