KEGG   Sphaerodactylus townsendi (Townsend's least gecko): 125437727
Entry
125437727         CDS       T08213                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
stow  Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:stow00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125437727 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:stow03041]
    125437727 (SMNDC1)
Spliceosome [BR:stow03041]
 Complex A
  U2 snRNP components
   U2 related factors
    125437727 (SMNDC1)
 Complex B
    125437727 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    125437727 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 125437727
NCBI-ProteinID: XP_048361558
LinkDB
Position
LG08:57458039..57469097
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALTGNGDNEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSSTSTLPVHTWKVGDRCMAIWSEDGQCYEAEIEEIDEENGTAAITFSGYGNAEVTPLL
NLKPVEEGRKAKEDNGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaagaccttgcaaaacaattagcgagctataaagctcagctccaacaagttgaa
gctgctttgactggaaatggagataatgaagatttactgaaactaaaaaaagacttgcag
gaagttatagaattaaccaaagaccttctttcaacacaaccttcagaaacccttgcaagt
tcagatagttcaacttctactctgcccgttcacacttggaaggttggagacagatgtatg
gcaatatggagtgaagatggacagtgctatgaagctgaaattgaagagatagatgaagaa
aatggtacagctgcaatcaccttttcgggatatggcaatgctgaagtcacacccctgcta
aacctgaaacctgtggaagaaggaaggaaagcaaaagaagacaatggcaacaaacctatg
tccaagaaagaaatgattgctcaacaacgagaatacaaaaagaagaaagctttgaaaaag
gctcagagaatcaaagaactggagcaggagcgagaagatcagaaagtcaaatggcagcag
ttcaacaacagagcctattcaaaaaacaaaaaaggccaggtaaaacggagcatctttgct
tctcctgagagtgtaacaggaaaggttggagttggaacatgtggaatcgcagacaaaccc
atgacacaataccaagatacatccaagtacaatgttagacatttaatgccccagtaa

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