Sphaerodactylus townsendi (Townsend's least gecko): 125442597
Help
Entry
125442597 CDS
T08213
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03013
Nucleocytoplasmic transport
stow03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125442597 (UPF3B)
03015 mRNA surveillance pathway
125442597 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125442597 (UPF3B)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125442597 (UPF3B)
mRNA cycle factors
P-body specific factors
125442597 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
125442597
NCBI-ProteinID:
XP_048370010
LinkDB
All DBs
Position
LG13:22649617..22658674
Genome browser
AA seq
486 aa
AA seq
DB search
MKEDKENARPKEKRGGPLTPTGFGAAMGGADAKAGGEPDKLERPKDKKETLLKVVIRRLP
PSLTKEQLEEHLQPLPEHDYFEFFANDSSLYPHMFSRAYINFRNQEDIVLFRDRFDGYVF
VDHKGLEYPAIVEFAPFQKAAKKKSKKKDAKAGTIEDDPEYKKFLESYSADDEKLASTPE
TLLEEIEARNKELIAKKTTPLLNFLKNKQRLREEKREERRRRELERKRQREEERRKWKEE
ERRKRKEAEKTKKVERFPEKERDRSKDEPKIKLLKKPEKDERDFEKKEKAKKLEKESLRE
EKATSAISSATAKRSDGEVKEEKAKKLVFSFQLEDECCKDYREREREYDRDREYERIQRD
RDKVRRQEDDRRRQKERFEKEKLFRRKEEDVKKERDSVREKGKRSELADYLGNMEKPEKV
TKEDKREDMAKRDRIRNKDRPAMQLYQPGARNRSRLCAYNESPSKPSDQGADKKLECEMS
NAKEED
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggataaggaaaacgccaggccgaaggagaagcgaggcgggcctctcaccccg
accgggttcggagcggccatgggcggagcggacgccaaagcgggtggcgagcctgacaag
ctcgaacggcccaaggacaagaaagagacgctcctcaaggtagtgattcgacgcctgcct
cccagtctgaccaaggaacagcttgaagaacatctccagcctctgcctgagcatgattat
tttgaattctttgctaatgattcaagtttgtatccacacatgttttccagagcatacatc
aactttagaaaccaagaagacatagttctattcagggatcgctttgatggttatgttttt
gttgatcacaaaggtctcgagtatcctgccatcgtggaatttgcaccatttcagaaagct
gccaaaaagaagagtaagaaaaaggatgccaaagctgggaccattgaagatgatccagag
tataagaaattcctggagagctacagcgctgacgatgaaaagctagcgtctacccctgag
actctgctggaagaaatagaggcaagaaacaaagaactgatagcaaaaaagaccactcct
ctgttgaacttcttgaaaaacaagcagaggctgagagaagaaaaacgagaggagaggcgg
aggcgggaattagagagaaaaagacaaagggaagaagagaggaggaaatggaaagaggaa
gaaaggaggaaaaggaaagaagctgaaaaaacaaagaaggtggagagatttccagagaaa
gaaagggacagatccaaggatgaaccaaagattaagctacttaagaagccagaaaaagat
gaaagagattttgaaaaaaaggaaaaggccaagaaactggagaaggagagtctgagggag
gaaaaggctaccagcgcaatcagcagtgcgacagccaagcgctccgatggggaggttaaa
gaggagaaggccaaaaagttagtgttctcttttcaattggaagatgaatgctgcaaagac
tatagggaaagagagcgagagtatgaccgggaccgagagtatgagagaatccagcgtgac
agggacaaggtcaggcgccaagaagatgatcgacggaggcagaaagaacgctttgagaaa
gagaagctgttcagaagaaaggaggaagatgtgaaaaaggaaagagactctgtgcgagag
aaaggaaagcgatctgaacttgctgactatctgggcaatatggagaaacctgagaaagta
accaaagaggataaaagagaagatatggctaagagggatcgcattagaaacaaggatcgc
ccagccatgcagctctaccagccaggggctcgaaaccggagtcggttatgtgcctacaat
gaaagcccttcaaagccatctgatcagggagcagataaaaagctggaatgtgagatgagt
aatgcaaaagaggaagactga
DBGET
integrated database retrieval system
