Sphaerodactylus townsendi (Townsend's least gecko): 125444805
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Entry
125444805 CDS
T08213
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stow04040
]
125444805 (SCN4A)
Ion channels [BR:
stow04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
125444805 (SCN4A)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ
GPHH
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
125444805
NCBI-ProteinID:
XP_048373453
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Position
LG15:complement(2006822..2125470)
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AA seq
1919 aa
AA seq
DB search
MAAPPHIPGPDCLRPFTRESLAAIEKRIADQKAKDLSKQHEEVLDEAHEPKPRSDLEQGK
SLPMIYGDPPLELIGVPLEDLDPFYQNQKTYIILSKGKAIFRFSATPALYMLSPFNIVRR
GAAKVLIHSLFSMFIMITILANCVFMTLSDPPTWAKDVEYTFTGIYTFESMIKILARGFC
IDSFTFLRDPWNWLDFSVIVMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGA
LIQSVKKLADVMILTVFCLAVFALIGLQLFMGNLRQKCVRWPPPINGTLEGETLGLDSDP
FGNGTLGTLANATLLGNGTANYTFDWDEYINDEGNAAWRPGTRDTVLFGNSSSAGKCPEG
FKCMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFILIIF
LGSFYLINLILAVVAMAYAEQNDATQLEEQEKEAEFQQMMEQLKKHQEEQQRLLQEQAAN
SSSADSIVVEKKKKGNSGQEAPSDQDCNNQAVPRLVLERSATIDESDLMEEPVKPDQNHL
QVGNQDGPGLQKRAESALSIVSNTLEELEEAHQKCPPWWYKFANAVLVWNCCPLWVKMKK
YIKIFVMDPFVDLGITICIVLNTVFMAMEHYPMTEEFNNVLTVGNLVFTGIFTAEMVLKL
VALDPYEYFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNML
IKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKEFVCKISTDCELPRWHMHDFFH
SFLIVFRILCGEWIETMWDCMEVAGQALCLTVFMMVMVIGNLVVLNLFLALLLSSFSADS
LAGSDDDGEMNNLQIAIGRITRGIDFVKKKALQLLHQEWKGKKEPPAKPQEDGKKENFVL
NHMDTGQDSKSDYVDGIVKKESVIDELRDVGQDSKSDYIDGIPKKQPVLNGVDISKSCKP
NYLDKIAKRAPFIDDLDHMNFINNPSLTIHVPIASEESDLYDETDTGEETAEDIKKPLSD
GTESSICSTVDYKPPDPEEEEVMAEETEENDEPEECFTEACVRRCPCLYVDVKTEKGAKW
WNLRKACFKIVEHKWFETFIIFMILMSSGALAFEDIYIGQRPTIRTILEYADKVFSYIFV
FEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLISLTANWMGYSELGAIKSLRTLRALRPL
RALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYRCINTTTDEL
FDISVVNNMSDCFALNYTNQIRWVNVKVNFDNVGFGYLSLLQVATFKGWMDIMYAAVDSR
EVEEQPQYEVNLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQK
KYYNAMKKLGSKKPVKPIPRPENKFQGMIFDFVTQQAFDIVIMILICLNMVTMMVETDDQ
SQTKIDILFQINLVFIVIFTSECLLKMVALRYYFFTVGWNIFDFVVVVLSIAGLLLSDLI
EKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYS
IFGMSNFAYVKKESGVDDIFNFETFGNSIICLFQITTSAGWDGLLNPILNSGPPDCDPHL
ENPGSAVKGDCGNPAIGIVFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLCEDDF
EMFYETWEKFDPDATQFIEYSILSDFADTLQDPLRIAKPNKIKLVTLDLPMVPGDKIHCL
DILFALTKEVLGDSGEMDALKASMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRA
FRRHLLKRSVKQASYVYRHSQDEATLAEGAPEKEGLVADNINSMYGPSATRAETEGSSEL
APPLSPELVADAKTDPSKKDDDPGIEKADEPSQAKEGGDAPRETKEGEATKRGFQESFV
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atggccgccccgccccacatccctggtccagactgcctgcgcccgttcactcgcgagtcc
ttggcagccatagagaaacgcattgccgaccagaaggccaaggacctgagcaagcaacat
gaagaggttctggacgaagctcatgagcccaagccccgcagtgacctggagcaagggaaa
agcctgccgatgatttatggggacccgcccttagagttaattggggtcccccttgaagac
cttgacccgttctatcagaatcaaaagacgtacatcattctcagcaaagggaaggccatc
ttccgattcagcgcgacccctgcgctctatatgttaagcccgttcaatattgtccggagg
ggtgcagccaaagtgctgatacattcattattcagcatgtttatcatgataaccatcttg
gcgaactgcgtcttcatgaccttgagtgatccgcccacgtgggccaaggacgtggaatat
acttttacaggcatctacacctttgagtctatgatcaagatacttgcccgaggattctgc
atcgacagctttacattcctgcgagacccgtggaactggctagatttcagcgttattgtg
atggcttatgtcacagagtttgtggatttgggcaacatctctgctctacggacgttccgg
gttctccgggcacttaaaaccatcacagttattccagggctgaaaacaattgtgggtgcc
ttgatccagtcggtgaagaagctcgccgatgtcatgatcctcaccgtgttctgcttggcc
gtctttgccctcattggcctgcaactcttcatggggaacctgcggcagaagtgcgtccgg
tggccaccccccatcaacggcactctcgaaggggaaaccttgggactcgatagcgacccc
tttggcaatgggaccctgggcacgttggcaaatgcaactctgcttggcaatgggacggcc
aactacacttttgactgggacgaatacatcaacgatgaaggtaatgcggcttggcgcccg
gggacaagggacactgtcttatttgggaacagttccagcgctgggaagtgcccagaaggc
ttcaaatgcatgaaagctggtcgaaacccaaactacggctacacgagttacgataccttc
agctgggccttcctggcgctcttccgcctcatgactcaagactactgggagaatctcttc
caactgactctgcgagcggctgggaagacatacatgatttttttcatcttgatcatcttc
ctgggctctttctacctgatcaacttgatcctggccgtggtggccatggcctacgccgag
cagaacgacgcgacgcagctggaggagcaggagaaggaagcggagttccaacagatgatg
gagcagctgaagaaacatcaggaggagcagcaaaggctgcttcaggaacaagcagcaaac
agcagctccgcagacagtatcgtggtggagaagaaaaagaagggcaactcgggccaagag
gcccccagtgaccaagactgcaacaatcaggcggttccacgcttggtgttggagcgatca
gccacaatagatgagtcagatctgatggaggaacccgtgaagcctgatcagaaccacttg
caagtgggcaaccaggatgggccaggtttgcagaaacgagcagaaagtgcgctcagcatt
gtctccaacactctggaagaactggaggaagcgcaccagaagtgtccgccctggtggtac
aagtttgccaacgccgtcttggtgtggaactgttgcccgctgtgggtaaagatgaagaag
tatatcaagatctttgtcatggacccctttgtggatctgggcatcaccatctgcattgtc
ctcaacactgtcttcatggccatggagcactacccgatgacggaggagttcaacaacgtg
ctgaccgtgggcaacctggtcttcactgggatattcactgctgagatggtgctcaaactg
gttgctctagacccctacgagtacttccaggttggctggaatatttttgacagcatcatc
gtcaccctgagcctggtggagctgggcctcgccaacgtccaggggctgtctgtgcttcgt
tcctttcggctgatgagagttttcaagcttgcaaaatcctggccgaccctcaacatgctg
atcaaaatcatcggcaactcagtgggcgccctgggcaacctcacgctcgtgctggctatc
attgtgttcatctttgctgtggtgggcatgcagttgttcggcaagagctacaaggagttc
gtctgcaagatctccaccgactgtgagctgccgcgctggcacatgcacgacttcttccac
tccttcctcatcgtcttccgcatcctttgcggggagtggatcgagaccatgtgggactgc
atggaggtggccggacaggccttgtgcctcactgtcttcatgatggtcatggtcatcggg
aaccttgtggtcctcaacctgttcttggccttgctgctgagctccttcagcgccgacagc
ctggcagggtccgacgacgacggcgagatgaataatttgcagattgcgattggcaggatc
acgcgagggatcgacttcgtgaagaagaaggcgctgcagctgctccaccaggagtggaag
gggaagaaggaaccgccggccaagccgcaggaagacggcaagaaggagaacttcgtcctc
aaccacatggacaccggccaggactccaaatcggactacgtggatggcatcgtgaagaaa
gagtcggttattgacgagctgcgtgacgtgggccaggactccaagtcagattacatcgac
ggcattcccaaaaaacagccggtccttaacggggtggacatcagcaagagctgcaaaccg
aattacttggataagatcgccaagagagcgccattcatcgatgacttggatcacatgaac
ttcatcaacaatcccagcctgaccatacatgtcccaatagcctccgaagagtctgacctg
tatgatgagacagacacaggggaagagacagcagaagacatcaagaagccgctgtcggac
gggactgagtcgtctatctgcagcacagttgactacaaacctcctgaccccgaggaggaa
gaagtcatggctgaggagacggaagagaacgatgaaccagaggaatgttttaccgaagcc
tgcgttcggcggtgcccttgcctctacgtggacgtcaaaacggaaaagggggcaaagtgg
tggaacctccggaaggcgtgtttcaagatcgtggagcacaagtggttcgagaccttcatc
atcttcatgatcctcatgagcagcggggccctagcttttgaagatatctacattggacag
cggccgacaatacgcaccattctggagtacgccgacaaggtcttcagctacatctttgtg
tttgagatgctcctgaaatgggtggcctacgggttcaaggtctacttcaccaatgcctgg
tgctggttagacttcctcattgttgatgtatctctgatcagcttgactgccaattggatg
ggctattctgagctgggagcgatcaaatcccttaggacgctccgcgcactgagacctctc
cgggccttatccagatttgaaggcatgagggtggtcgtgaatgcccttctgggggccatc
ccatctatcatgaacgtcctcttggtctgcttgatcttctggctcatcttcagcatcatg
ggggtcaacctctttgcagggaagtattacagatgcatcaataccaccaccgacgagctc
tttgacatcagcgtcgtgaacaacatgagcgactgttttgccctcaactacaccaatcag
attcgctgggtcaacgtgaaagtcaattttgataacgtgggctttggctacctctctctt
ctgcaggtggccaccttcaaaggctggatggacatcatgtatgctgccgttgactctcgt
gaggtggaggaacagccgcagtatgaagtaaacctctacatgtacatctattttgtcatc
ttcatcatctttggtgcattcttcaccctcaacctgtttatcggtgtcattatcgacaat
ttcaaccagcagaagaaaaagtttggaggaaaggacatcttcatgacagaggaacaaaag
aaatactacaatgccatgaagaagctgggctcaaaaaagcccgtgaagcccatccctaga
cctgagaacaaatttcaagggatgatctttgactttgtgactcagcaagcctttgatata
gtcatcatgatcctcatttgtcttaacatggtgacgatgatggtggaaacagacgaccag
agccaaaccaaaatagatatcttattccaaatcaacctggtcttcatcgtgatcttcaca
tctgagtgcttgctcaagatggtggccctgaggtactacttcttcaccgttggctggaac
atctttgatttcgtcgtagttgttctctccattgcaggacttctcctctcggacctcatt
gagaagtacttcgtgtcccccacgctcttcagggtcattcgtttggccagaatcgggcgt
gtcctccggctgatccggggcgccaagggcatccgcaccctcctcttcgccttgatgatg
tccctgccagccctctttaacatcggcctgcttctcttcttggtcatgttcatctattcc
attttcggcatgtccaattttgcctacgtgaagaaggaatccggagtggacgacatcttc
aactttgagactttcggcaacagcatcatttgcctcttccagatcaccacctccgctggg
tgggacggcttattaaaccccatcttgaacagcggccccccagactgcgaccctcacctt
gaaaaccccggcagcgcagtcaagggcgactgtgggaaccctgctatcggcattgtcttt
ttctgcagctacatcatcatctccttcctgattgtggtcaacatgtacattgccatcatc
ctggagaacttcaacgtagccacggaagagagcagcgagccactgtgtgaagacgacttt
gagatgttctatgaaacgtgggagaagtttgatcccgatgccacgcagttcattgagtac
agcatcctctctgattttgcagataccttgcaagaccccctgcgcatcgccaaacccaac
aagatcaagttggtcaccttggacctgcccatggttccgggggataagatccattgcttg
gatatcctctttgccctgaccaaagaagtgttgggggactctggggaaatggatgccttg
aaagcatccatggaggagaaattcatggccgccaatccctccaaggtgtcttatgaaccc
atcacgaccacactgaaaaggaagcacgaggaagtgtgtgccatcaaaatccagcgggca
ttccggcgacatctcctaaagcggtcggtgaagcaggcctcttacgtgtatcggcacagc
caggatgaggccacgctggccgaaggcgccccggagaaagaaggactggttgcagataac
atcaattcaatgtacggcccttcggcaacccgggcagaaactgaagggtcatcagaactg
gccccacctctcagccctgagttagttgccgacgcaaagacagaccccagtaaaaaggat
gacgatccagggatagagaaagcggacgagcccagccaagcaaaagaggggggagatgcg
cccagagaaacgaaagagggggaggccaccaaacgcggcttccaagagtcgttcgtataa
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