Sphaerodactylus townsendi (Townsend's least gecko): 125445752
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Entry
125445752 CDS
T08213
Symbol
POM121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121
KO
K14316
nuclear pore complex protein Nup121
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125445752 (POM121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125445752 (POM121)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125445752 (POM121)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
125445752
NCBI-ProteinID:
XP_048375025
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All DBs
Position
LG16:complement(18846064..18863899)
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AA seq
1166 aa
AA seq
DB search
MSRGGSGPGWGWWPPSRRRPGRRRRPAAEGDGADGGRTWALPALAGLAVAASLSLLVLLL
GLSGAALAVAAGGGAWAAAAASVGKSRKPPLLARSAPVAAPWCKAGALANGGPAVSCSPA
ERRRLYGDPLTPPTHFALRRRYPIKKAQYASFGTLPSICWDSYRRKTTLSTHNSCMIQSP
VTVKIARPDSSIGRSPLLEQLASPLAFSPTPNSTLDPCAKETVLSALKESRKRNVEDDDQ
SFPSGQENKRRRHDSSGSGQSAFEPLVANGTLASLVPKPGSLKRSLISQCLDNCSSKRSR
TSSLSSVNSLYVGGIPSSIRNAIASSYSSTRGISQLWKRSGPSTSPLSSPASSRSQTPER
PNKKARHPDSSLTEAESHQSSTSTPVKASTERQAEKRAETPVQNRHTSLGLQSSSGSNGK
RKRKIQLLSAQRGDNFTLPPPPQVGYAVTSEDLDAEKKATLQWFNKALEDKSDSTPSTSA
EIASPPSTLSSLIPAPVPLTSMGAGTNPLLESLKKMQEGHGGVVQADSASAAQTPETAAP
VPLDLGSPVSVTSPEVKPSVTLSVPPSLAPPSSAAAQPASSLITTSCELGQTPSRPSSAP
KPSILFGILTSPPASQPTTTAAAASSASNTTPVFKPIFGNVTKIESAGFSSGSTSATVTS
SPGTAPSSAPPPVSLSSSTFKPIFGSVLPLATAAPTTTTASFFGFKSTPQPAPGLSTTSS
ALSGFPVLSESVVTTAMSPLAPVSVTTVSTSAPVFSFGLGMPASTSAPSSTTTVTTASSQ
PFMFGVPSSGAAASSAAAAPLFLFGKPSTTAGPSNPLASSAFSQAPASTAESVLSSSTTA
AGGFNIFSSGGSSAATTQAPSAAPPSTQPTLTFGSGPSPFSGAFATPSKPPPPYPGDANQ
LTFEPGVPDGQQQQLSTKPPAAASPVSFGTPFSFSGSVAQPAAQPAFGSATQTTFGGTGP
LASFGTKSTAQPAFGATTSIFSFGTATTSATAGFGSSTQTTNSSTGGSVFGSATASPFTF
GATNAPTAAGGTFGIGAPVAAGSSTPMVGFSFGGQSGGATPFASSMAQIPLGAQNQNAPF
AFNIPGTPENKPAFGGAPAPAFGQGSAAPGGTTGGSSLSFGTPIAPTFGGSGPTFGPTTL
GFSIGAGSKQVSRQRLQARRQHTRKK
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggcgggtcgggccccggctggggctggtggcctccgtcgcggcggcggccg
ggcaggcggcggcggcccgctgcggaaggggatggcgccgacgggggccggacctgggcg
ctgccggcattggcgggcttggcggtggcggcctcgctgtcgctgctcgtcctcctgctg
ggcctctccggggcggcgctggccgtggcggcggggggaggagcctgggcggcggcggcg
gccagcgtggggaaaagcaggaagccgccgctgctggcgcggtccgcccccgtcgcagcc
ccctggtgtaaagccggcgccttggctaatggaggccccgctgtgagctgcagcccggcc
gaacggaggcggctctacggggatcccctaactccacccactcactttgcgctgcgccgg
cgctacccaatcaagaaggcccagtatgcctcctttgggactctgccttccatttgctgg
gacagttatcggcggaaaaccacgctgtctacgcacaactcctgcatgatccagagcccg
gtgacggtgaagattgctcgaccggacagcagcattggccggtccccgctgttggaacag
ctggcttctcctttggctttctctccaacgcccaacagcaccttagacccctgtgcaaag
gagactgtgctgagtgctcttaaggagagtaggaagaggaacgtggaagatgacgaccaa
agttttccaagtggccaagaaaacaagagacggcgccatgacagcagtggaagcggacag
tctgcttttgagcccctcgttgccaatggaaccctggcgtctctggtacccaagcccggt
tctctgaagcggagcctcatctcccaatgtttggacaactgctcctccaagaggtcacgc
acatcctccctcagttccgtgaacagcctgtatgtgggcggaatccccagttccatccgc
aacgccatcgccagctcctacagctccacccggggcatctctcagttgtggaagagaagc
ggcccaagtacctctcctctctccagtccagcctcctcccgctcgcagactcccgaaagg
cctaacaaaaaagcaaggcatcccgactccagcctcacagaggcagagtcgcaccaatcc
agcacatcaacccccgtgaaggccagcacagagaggcaggcagagaaacgtgcagaaaca
cctgtgcagaacagacacacctctctaggtttgcagtcctcatcgggcagcaacggcaaa
cgcaagcgcaagatccaactgctctctgctcagcgtggagataatttcaccttgcctcct
ccacctcaggtgggctatgctgtcacctctgaggacttggatgcagaaaaaaaggcaacc
ttgcagtggttcaacaaggccttggaggacaaatccgattctaccccaagtacatctgca
gaaattgcctccccacccagtaccttgtcctcgctaatccctgcccctgtgccattgacc
agcatgggtgcagggaccaatccgctgttggagagcctgaagaagatgcaagaaggacat
ggcggtgtggtgcaggcagattcagcttctgccgcgcagactcctgaaacagcagccccc
gttcccctggatctgggctcacctgtatctgtgacctcaccggaggtcaagccctcagtt
acgctgagtgtacctccatccttggctccgccttcctccgctgctgcccagcctgccagt
agtttgataacgacttcctgtgaattgggccaaaccccgtcaaggccctcctcggcccca
aagccaagcatcctctttggaatcctcaccagccctcctgccagccaacccaccaccaca
gcagcagcagcgtcttctgcttccaacacaacacctgtattcaaaccgatctttggcaac
gtgacgaaaatagagagcgccggtttctcgtcaggcagcacctccgcaaccgttacgtcg
tctccaggaactgcgccctcctctgcacctcctccggtttccctcagcagcagcacgttc
aagcccatctttggcagcgtgctgccactggccactgctgccccaaccaccaccacggca
tctttctttggattcaagagcacccctcagccggcccccggtctctccaccacctcaagc
gcgttgtctgggtttccagttctctccgagtctgttgtgaccacagcgatgtctcccttg
gccccagtaagcgtgacgacagtctcaacaagcgcaccggtgttcagctttggccttggc
atgccagcttccacgtctgcacccagcagcaccacgactgttaccaccgcgtcatcccag
cccttcatgtttggggtcccctccagtggcgctgcagcttccagcgcagctgcagcaccc
cttttcctgtttgggaagccgtctaccaccgctggccccagcaaccctttggccagctct
gccttcagccaggcacccgccagcaccgccgagtctgttcttagcagcagcaccacggct
gcggggggcttcaatatcttcagcagcgggggcagcagcgccgcaaccactcaggcgcct
tctgccgcaccaccttcaacgcagcctacactgacgtttgggtccggcccttctcctttc
agcggggcctttgccaccccttcaaaaccaccccctccatacccgggggatgccaaccag
ctgacttttgagcctggtgtgcccgacgggcagcagcagcagctcagcaccaagccgccg
gcagcagccagccccgtgagcttcgggacccctttcagcttctccggctcggttgctcaa
cctgccgcgcagccggcgtttggcagcgccacgcagacgacctttggcgggactgggcct
ctagcatccttcggcaccaaaagtactgcccagccggcatttggagccacgacctccatc
ttctcctttgggacagccaccacatcagctacagcgggttttggatccagcacccagact
acgaacagcagcacggggggctcagtgtttggtagcgccaccgcatctccattcacattc
ggggcgaccaacgcgcccacagcagcaggtggcacctttgggattggcgctccagtggct
gcaggctccagcacccccatggtcggcttcagtttcggtggacagagtgggggtgccacg
ccctttgcctcttccatggcacaaatcccgctgggtgcccagaaccagaatgcacccttt
gctttcaacatccccggcactccagagaacaagccagcatttggaggggctcctgcccct
gcttttggccagggctctgctgcaccaggaggaacaactgggggcagcagcctttctttt
gggacccccatcgcccccacctttggaggatcagggccgacatttgggccaacaacactc
ggattctccatcggggcagggtccaaacaggtgagccggcaacggttgcaggcccgacgg
cagcatactcgtaagaagtag
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