Spirochaeta thermophila DSM 6578: Spith_0404
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Entry
Spith_0404 CDS
T02016
Name
(GenBank) pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
stq
Spirochaeta thermophila DSM 6578
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stq03009
]
Spith_0404
Enzymes [BR:
stq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Spith_0404
Ribosome biogenesis [BR:
stq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Spith_0404
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AEJ60688
UniProt:
G0GEK0
LinkDB
All DBs
Position
complement(491200..492102)
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AA seq
300 aa
AA seq
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MGDYQVFESGPDDHGKRLDRIVRTLLSHLPLSRVFRALRTGEILLEGKRVPPSTRVSRGA
RIHIDRSLLPERKPQQKGKASSLPILLETDHLLILNKPPGAVVHGPGSLTDQVRSYLKDR
IPPSLAFTPSPLHRLDRLTSGILVFSRSIHGARWFTQALREGRIEKTYLALLEGTLAEPA
RWEDLLTREGRRSRPSPHGRPALTDVRPLLAAPTATLVLCTIHTGRMHQIRVQAALRGHP
LLGDTAYGSTRRIRPVLHAWRLRPLSPSPLFPADGVQAPLPDESETILSRILPGWEDALP
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgggagactaccaggtcttcgagtcaggaccggatgaccacgggaagcgcctcgatcgc
atcgtccgaaccctcctctcccacctccccctctcgcgggtcttcagggccctccgaacc
ggggagatactcctcgaggggaaacgcgtccccccttccacacgggtctcgagaggagct
cgcattcacatcgaccgttccctcctccccgagcggaagccacaacagaagggaaaagcc
tcctctctccccatcctcctggaaaccgatcacctcctcatcctcaacaaaccacccggc
gccgtggtccacggtcccgggtccctcaccgatcaggtacggtcctacctgaaagaccgc
atccccccctcgctcgccttcaccccctcccccctccacaggctcgacaggctcacctcg
gggatcctcgtcttctcccggagcatccacggcgcgcgatggttcacccaggccctcagg
gaaggccggatcgagaagacctacctcgcccttctggagggaacccttgccgaacccgcc
agatgggaggatctcctcacccgggagggacggcggagcagaccttcaccccacgggagg
cctgcactcaccgacgtgcgccccctcctcgctgcccccacggccaccctcgtcctctgc
accatccacaccggccggatgcatcaaatacgcgtccaggcggccctccgcgggcacccc
cttctgggcgacaccgcctatggaagcacccggcgcatccgtcccgtactccatgcctgg
aggctcagacccctctctccctcccccctcttccctgcggatggggtacaggcccccctc
ccggacgagagcgagaccatcctctcccgcatcctccccggatgggaggatgccctcccc
tga
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