Spirochaeta thermophila DSM 6578: Spith_1353
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Entry
Spith_1353 CDS
T02016
Name
(GenBank) glycoside hydrolase family 4
KO
K22933
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
stq
Spirochaeta thermophila DSM 6578
Pathway
stq00040
Pentose and glucuronate interconversions
stq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Spith_1353
Enzymes [BR:
stq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
Spith_1353
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Gene cluster
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Motif
Pfam:
Glyco_hydro_4
Glyco_hydro_4C
Motif
Other DBs
NCBI-ProteinID:
AEJ61617
UniProt:
G0GFS4
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Position
1521804..1523189
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AA seq
461 aa
AA seq
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MSHVQQSLEIAYIGGGSRGWAWKLMADLALEPALTGRVRLYDIDQEAARLNERIGNRLSS
RSDVKGKWHYETRTSLKDALEGVDVVIISIMPGTFKEMEVDVHAPEPFGIYQSVGDTTGP
GGLFRALRTIPIYEEFAQAIKTWAPKAWVINYTNPMALCVRTLYEVFPEVKAFGCCHEVF
GTQELLASMVVHEGLVQDPPQRREIHINVLGLNHCTWIDRASFRGVDLLPMYRRFAERHR
EEGFETGGERTWENDYFTSAHKVKFDLFLRFGLIAAAGDRHLAEFFPVSWYLKDPETVRS
WKFSLTPVSWRVENQKSLEARARRLASGEEEVELAPSGEEGVLMLKAIAGVEETVSNVNL
PNRGQIANLPPGTVVETNALFRYDSVQPVQAGALPSSLLGHLTRHVAQQETISRAGLERN
WDLAFRAFLSDPLVAHLSPSEAERLFSLMREKLSPSMPGWE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacgtacaacagtcactcgagatcgcctacataggagggggatcccgcggatgg
gcatggaagctcatggcggatctcgcactcgaacccgccctcaccggaagggtccgcctc
tacgacatcgatcaggaggcggcgcgcctcaacgaacggatcggcaaccggctctccagc
cgctccgatgtgaaggggaagtggcactacgagaccaggacgagcctcaaggatgcgctc
gagggcgtggatgtggtgatcatctccatcatgcccggcaccttcaaggagatggaggtg
gacgtccatgcgcccgagcccttcgggatctaccagtcggtgggcgacaccacgggaccg
ggcggcctgttcagggccctgaggaccattccgatctacgaagagttcgcgcaggccatc
aagacctgggcgcccaaggcctgggtgatcaactacaccaaccccatggcactctgtgtg
cggaccctctacgaggtgttcccggaggtgaaggccttcggatgctgtcatgaggtcttt
ggaacccaggaactcctcgcctcgatggtggtacacgagggccttgtccaggatcctccg
cagcgcagggagatccacatcaatgtcctggggctgaaccactgcacatggatcgacagg
gcttcgttccggggggtggacctcctcccgatgtaccggcgcttcgcggagcgtcacagg
gaggaggggttcgagacagggggcgaacgaacctgggagaacgactacttcacgagcgcc
cacaaggtgaagttcgacctcttcctgcggttcggactcatcgcagcggcaggggacaga
catctcgcggagttcttccctgtatcctggtacttgaaggaccccgagaccgtgcgctcc
tggaagttcagtctcaccccggtctcctggcgggtggagaatcagaagtcgctcgaggcg
cgggcgcggaggctcgcctccggtgaggaagaggtggagctcgccccgtcgggagaggaa
ggggtcctcatgctgaaggccatcgctggggtggaggagacggtgagcaacgtgaacctt
cccaaccgaggacagatcgccaatctcccgccggggacggtggtggagaccaacgccctc
ttcaggtacgactcggtgcaacccgtccaggccggggcccttccctcttccctcctcggt
catctcacccggcatgtggcacaacaggaaaccatctcgagggccggtctcgagcggaac
tgggacctcgccttcagggccttcctctccgatcctctcgtagcccacctttccccgagc
gaggccgagaggctcttctccctcatgcgagaaaaactctcgccctcgatgcctggctgg
gagtga
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