Streptomyces sp. CNQ-509: AA958_26770
Help
Entry
AA958_26770 CDS
T03968
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
strc
Streptomyces sp. CNQ-509
Pathway
strc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
strc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AA958_26770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strc03021
]
AA958_26770
Transcription machinery [BR:
strc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AA958_26770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Motif
Other DBs
NCBI-ProteinID:
AKH85239
UniProt:
A0A0F7NCN6
LinkDB
All DBs
Position
6220530..6222056
Genome browser
AA seq
508 aa
AA seq
DB search
MALIERGKAEGQIAGDDVRRAFEVDQIPPTQWKSVLRSLNQILEEEGVTLMVSAAEAPKR
TRKSVPAKTPAKRTATKAVAKQAVPAKTATKKPTATATAHAVQEAPMDDPVPAGLGDPAD
EPEKKAAAKKTTAKKAAAKKTAAKKAPAKKAAGKKGAAKDGESGAEGPDDGSLEKEEPPA
EAEAEGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLNAEQEVELAKRIEAG
LFAEDKLAAADKLAPKLRRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDL
IQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLA
RVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIE
DSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTR
ERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcactcatcgagcgggggaaggccgaagggcagatcgccggtgatgacgtgcgtcgt
gccttcgaggttgaccagattccgcccacccagtggaagagcgtcctgcgcagcctcaat
cagatcctcgaagaggagggtgtgacactgatggtcagtgccgcagaggcgcccaagcgc
acccgcaagagcgtgccggcgaagaccccggcgaaacggaccgccaccaaggcggtcgcc
aagcaagccgtccccgccaagaccgcgacgaagaagccgacggccacggccacggcgcac
gcggtccaggaggcccccatggacgatccggtgcccgcgggcctgggcgacccggcggac
gagccggagaagaaggccgccgccaagaagaccaccgccaagaaggcggccgccaagaag
accgcggcgaagaaggccccggccaagaaggcggccggcaagaagggcgcggccaaggac
ggcgagtccggtgccgagggcccggacgacggctccctggagaaggaggagccgcccgcc
gaggccgaggcggagggcttcgtgctctccgatgaggacgaggacgacgcccccgcgcag
caggtcgccgcggccggcgccaccgccgacccggtcaaggactacctgaagcagatcggc
aaggtccccctcctcaacgccgagcaggaggtggagctcgccaagcggatcgaggccggc
ctcttcgccgaggacaagctcgccgccgccgacaagctggcgcccaagctccgccgcgag
ctggagatcatcgccgaggacggccgccgcgcgaagaaccacctgctggaggccaacctc
cgcctcgtggtctccctcgccaagcgctacacgggccgcggcatgctcttcctggacctt
atccaggaaggcaacctcggtctgatccgcgccgtcgagaagttcgactacaccaagggc
tacaagttctccacgtacgccacctggtggatccggcaggcgatcacccgcgcgatggcc
gaccaggcccgtacgatccgcatccccgtgcacatggtcgaggtcatcaacaagctggcc
cgcgtgcagcgccagatgctccaggacctgggccgcgagcccaccccggaggagctggcc
aaggagctggacatgaccccggagaaggtcatcgaggtccagaagtacggccgcgagccc
atctccctgcacaccccgctgggcgaggacggcgacagcgagttcggcgacctgatcgag
gactccgaggcggtcgtgccggccgacgcggtcagcttcaccctgctgcaggagcagctc
cactccgtcctcgacacgctctccgagcgcgaggcgggcgtggtctccatgcgcttcggc
ctcaccgacggccagcccaagaccctggacgagatcggcaaggtgtacggcgtcacgcgc
gagcgcatccgccagatcgagtccaagaccatgtcgaagctgcggcacccgtcgcgttcc
caggtgctgcgcgactatctcgactga
DBGET
integrated database retrieval system