Salmo trutta (river trout): 115148271
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Entry
115148271 CDS
T08542
Name
(RefSeq) nuclear envelope pore membrane protein POM 121-like
KO
K14316
nuclear pore complex protein Nup121
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115148271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115148271
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115148271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
115148271
NCBI-ProteinID:
XP_029546077
Ensembl:
ENSSTUG00000028468
LinkDB
All DBs
Position
15:29011790..29024975
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AA seq
1184 aa
AA seq
DB search
MSSREKRLIALISLVFCATAIFYLVLYYIPTLLYIAFILGVCCVACYYHSGESLYVRLGP
HPRRGLTIPPVLRRWLPGIANGVPTAGRVRSRTAKDDVRESVVFTDQRRFESSICRKDAG
HSDSFLLSPRDILMGSYIGKAESPPSVVGRPRAGASSGANPNTREQLTLRERLARPNQAV
ITPNRRLSFGGEPLGTMGRFTITPQRHYPLQQTGTSSVGILPPTQWDGFRKKNILTPRNS
PAVHSPVTVKIARPDHNTTRSQLFDHLNSPGVLGSPGLGAPADPCSRETVLSVLKESRKR
VVEDDRSFTAGQKSKRRRHDSSGSAHLAFEPLLPNGAPSQLVLNSLKRGLTAMVEESTMK
RSRTSSISSVSCGLTPSGTLGSVRNSIRSSLSSSQGVTQWKKASTRSLSPLSSPGSSRSQ
TPERASKKPREEDARSPSSVSLVRSDKTLTDPAPTTGKLAPAPEVPVASASSGSAGSGKR
KRKIPLVSSRRGDQISLPPPPELGYTITVKDLDQEKKAALSQINTVLKEPEPEKPAPVVT
TSSKPPVSDNPTPTLQASHLTVSMPATVAAPIPVINLDPVPSSTVNTAPTSTASPVTNPL
LESLKMMRNNPLTSAAADNTTAVTSPAPLVPAEQKSKTCLTAPQPAIPSLSQPAIPSLSQ
PAIPSLSQPAIQPALPSLSQPALPSLSQPALPSLSQPASTMPSAFTQALSQVTKAPSSVP
ILGGASLFGMANPLTAPSSSPAPTTTTTATTETTSSNNPLLASVFKPIFGAPASEGTPAL
PTFKPIFGSATATSAFGQPASTSAPSNASASATVFSRLTNSSTVAPAASLFTGLSNSTST
NPAAPPSVKSLFGNWSALPATTAATTTAPATGSTFQFGTASTTAPGPTLSSTTAATTSNS
GFSFGAMTTTSGATQPAPSATAQGGFTFGQPVATQNSTTASFGGFGMATAASATATASAP
ANQSTFTFGKSSFEAPAASAFPSAIQAPAATAAANPFTFGSPATGAAPFAFGAAATTAAS
TFGTTTKLAFGANSTGFAFGNTTGTPAAPAFGSATQTVGILPASAPTFSFGGVSTQQAPA
TPAQPATGGFNFGAAISGTQFGTSNPTTQTPGFNFGMATPAFGQSTAAGPVPFGSPGTPV
QGFSAMGSSSFGSPSAPSFSIGAGSKTSGARQRLQARRQHPRKK
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagagagaagcggttaatagcgcttatctctctcgtgttctgtgctaccgca
atattttatctagttctctattatattccaacattgctttacatagctttcattcttgga
gtttgttgcgttgcctgttattatcacagcggagaatctctttacgttaggttaggccct
catccacgccgtggtctgacaattccacccgtgctgcgacgctggttgccagggattgca
aacggagtacccacagcgggaagagttagaagtcgcaccgccaaggatgatgttcgggaa
tcagtagtatttactgaccaacgacgtttcgagagctctatttgtcggaaagacgcggga
cacagtgactcatttcttctcagtcctcgggatatactcatgggaagttacattgggaag
gcagaaagtcctccctcagttgtggggaggccgcgagcgggtgcaagttcgggtgctaac
cccaacacacgagaacaactaactttacgtgaaagattggcgcgacccaaccaggctgtc
attactccaaacagacgactgtcattcgggggggagccccttggcactatgggcaggttc
accatcactccccagcgccactaccccctccagcagacgggcacctcctctgtgggcatc
ctgcccccaacccagtgggacggcttcagaaagaagaatattctcacccctcgcaactct
ccggcagtccacagtccagtcacagtgaagatcgctaggccagatcacaacaccactcga
tcccagttatttgatcatttgaactccccgggagtccttggctctccaggcctgggggcc
cctgcagacccctgctccagggagactgttctaagcgtgctcaaagagagtcgcaaaaga
gtggtggaagatgacaggagcttcactgcagggcaaaagagcaaaaggaggcgccatgac
agcagtgggagtgctcacttggcatttgagccactactgcccaatggagctccatcacag
ctggtgctgaattctctgaagcgagggctgactgcaatggtggaggagtcaacaatgaag
aggtcacgcacctcctccatcagctctgtgagctgtggcctgacccccagcggcaccctg
ggctcggtccgcaactccatccgcagctccctcagctcctcacaaggcgttactcagtgg
aaaaaagcctctacccgcagtctctccccgctctccagccctgggtcgtcccggtcccag
accccagagagagcctctaaaaagcccagggaagaggacgctcgctcacccagctctgtg
tccttggtgaggtctgacaagacgttgacagacccagcaccaaccactgggaagctggct
ccggcccctgaagtccctgtggcttcagcctcgtcaggctctgccggtagtgggaaacgg
aaacgtaagattccgctggtgtccagccgtagaggagaccaaatctctttgcctccacct
cctgagttgggctacaccatcacggtgaaagacctggatcaggagaagaaagctgctctc
agccagatcaacacagtcctcaaagagcccgagccagagaagcctgctccagtagtgacc
acatcttctaagcctcccgtgtcagacaaccccacacccaccctgcaggccagccatctt
accgtatcaatgcctgctactgtggcggctcctatccccgtcatcaacctggaccccgtc
ccctcaagcactgtcaacacggccccaacctccacagcctcccccgtcaccaaccccctc
ctggagtctctgaaaatgatgaggaacaaccccctcaccagtgctgctgctgacaatact
acagcagtgacttcccctgcaccactggtgcctgcagagcagaagtcgaagacctgcttg
actgctccccagcctgcaataccctccctctcccagcctgcaataccctccctctcccag
cctgcaataccctccctctcccagcctgcaatacagcctgcactaccctccctctcccag
cctgcactaccctccctctcccagcctgcactaccctccctctcccagcctgccagcacc
atgccctctgccttcacccaggcgctgagccaagtcaccaaggcccccagcagtgtcccc
atcctgggtggagcaagcctgtttggaatggccaatccactgactgccccgtcctcctca
ccggcccccaccactaccacaaccgccaccacagaaacaaccagtagtaataatcccctc
ctggcctcggtgttcaagcccatcttcggggccccagcctcagagggcacacctgctctt
cccacctttaaacccatatttggaagtgccacagccactagtgctttcggacagccagcc
tccacctcagccccatccaatgccagtgcatctgccacagtgttcagcaggctaaccaac
agcagtacagtggccccagccgcctccctgttcactgggctgtctaatagcacctccacc
aacccagccgccccgccatctgtcaagtctctgtttggaaactggagtgcgctgcctgca
acgactgctgccacaaccactgcccctgccacaggaagtacattccagttcggcaccgcc
tccaccacagctcctggacccaccctcagctccaccacagccgccaccactagcaacagc
ggcttttcgtttggtgcgatgaccaccacctctggcgccactcaacccgccccctcagcc
accgcccaggggggattcacctttggccagcctgtagccacccagaactctaccaccgca
tccttcggtggctttggcatggccactgcagcctcagccactgctactgcttctgcacct
gcaaaccagtccactttcacgtttgggaagtcgtcgttcgaagctccggcggcatcggcg
ttccccagtgcgattcaggccccggctgctactgcggcagctaatcctttcacatttggg
tcacctgccactggggctgccccttttgcttttggcgcggctgccactacggcggcctct
acctttgggaccaccactaagctggcatttggagcaaactccacaggttttgcatttggc
aacaccacgggcaccccagcagcccctgcctttggctctgccacccagactgtcggcata
ctcccagcctccgccccaactttctcgtttggtggtgtgtccacacagcaggcccctgct
acccctgcccagccagccactggaggattcaacttcggcgcagccatttcaggcactcag
tttggaacctctaaccccacaacacagacgccaggcttcaactttgggatggctacccct
gcttttggccagagcacagctgcaggtcctgtcccctttggaagcccaggaactccagtc
caaggattcagtgctatgggatcctcatcattcggctctccatcagctccttcgttctcc
atcggcgctggctccaaaacatcaggggcgcgccagaggctgcaggcccgaaggcagcac
cccaggaagaagtag
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