Salmo trutta (river trout): 115148607
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Entry
115148607 CDS
T08542
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115148607
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115148607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
SPX
zf-RING_6
zf-Nse
Bac_RepA_C
Motif
Other DBs
NCBI-GeneID:
115148607
NCBI-ProteinID:
XP_029546509
Ensembl:
ENSSTUG00000008452
LinkDB
All DBs
Position
15:21150398..21156446
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AA seq
592 aa
AA seq
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MATSMDSISCSICLDPLKDPVAIPCGHSYCMGCIKDYWDQDYQKGVYSCPQCRQTFIPRP
VLNTNTLLTELVESLKKTGQAAPLDHCYAGPGDVECDVCTRRKLKAVKSCLECLASYCET
HLQPHYESPTFKKHKLVKASTQLQEKICSRHDKLLEMYCRTDQQIICYLCMIGDHKGHDT
VSAESERVERQRQQGEKQRIQKIKKEMQEVRRSVKSLKRSAQAAVEESEKIFTELICTFE
RRCSEVKELIKAQEKAAVSQAEGLLKQLEQEIAKLRKRDAELEQLSHTEDHIHFLQVTSL
VSLSTATLQSLCVPPGSEALLSITVNQHVSFEDVKKSVSELKNQIEVICSGEIALISAKM
TKVQIFPPVEPCCLTSFSTPQSDLLVGELASCRNDATLQKIRPEPKTREEFLEYSCQLTL
DPNTANNWLCLSEGNRKVTWSPWSNKAQPYPDHPDRFSSYEQVLCREGLSGTCYWEVEWS
AFKAYIAISYKGIGRIGRGDECWFGGNDQSWSLVCCSILGCYFYHNNKRTATRVPRSSRI
VGVYLDHRAGTLSFYSVSDTMTLLHRVQTTFNQPLYPGFWIYAGSSVKILNQ
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatccatggattcgatcagttgttcgatctgcctggatccactgaaggatcct
gtagctattccctgtggacacagctactgtatgggttgtattaaggattactgggatcag
gattaccagaagggtgtctacagctgcccgcagtgcagacagactttcattccaaggcct
gttctaaacacgaacactctgctgactgaattggtggagagtctaaagaagacaggacaa
gctgctcctcttgatcactgttatgctggacctggagatgtggagtgtgacgtctgcact
aggagaaaactcaaagctgtcaagtcctgtctggagtgtctggcctcctattgtgagact
caccttcaacctcactatgaatcacctacatttaagaagcacaagctggtcaaagcctcc
acacaactacaggagaagatttgctctcgtcatgacaagctgctggaaatgtactgccgt
accgatcagcaaattatctgttacctctgtatgataggtgatcataaaggccacgataca
gtgtcagctgaatcagaaagggttgagagacagaggcagcagggggagaaacagagaatc
cagaagataaagaaagagatgcaggaggtgagacgttctgtgaagtcactgaagcggtct
gcacaggcagcagtagaggagagtgagaagatctttactgagctaatctgcacctttgag
agaaggtgttctgaggtgaaggagctgatcaaagcccaggagaaagcagcagtgagtcag
gctgaaggacttctgaagcaactggagcaggagatagccaagctgaggaagagagacgct
gagctggagcagctttcacacacagaggatcacattcatttcctccaggtgacatcactg
gtttcgctctccacagcaactttgcagtccctctgtgtccctcctggatctgaggcctta
ctgagcatcactgtcaaccaacatgtctcttttgaggatgtgaagaaatcagtgtctgag
ctgaaaaatcaaatagaagttatctgctctggggaaattgccttgatctctgcaaaaatg
acaaaagtccagatttttccacccgttgagccctgttgtctcacgtcattcagcacgcct
cagtctgatctgttagttggtgaactagcgtcatgtagaaatgatgccaccttacagaag
ataaggcctgaacccaagaccagagaagagttcttggaatattcctgccagctcacattg
gatcccaacaccgctaataactggctgtgtctgtcagaggggaataggaaggtgacgtgg
agtccatggagtaataaggcccagccttatcctgaccatccagacagattttcctcctat
gaacaagtcctatgtagagagggtctgtctggaacctgctactgggaggtagagtggagt
gcattcaaggcttatatagccatctcatataaagggattggcagaataggacgtggtgat
gagtgttggtttggaggcaatgatcagtcctggagtttggtgtgttgttctatccttggc
tgttatttctaccacaataacaaacggactgccacacgtgtaccccgctcttccagaata
gtaggagtgtacctggaccacagggcaggaactctgtccttctacagcgtctctgacaca
atgaccctcctccacagagttcagaccacatttaatcagcccctctatcctgggttctgg
atttatgctggatcatctgtaaagatactgaaccagtga
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