Salmo trutta (river trout): 115150231
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Entry
115150231 CDS
T08542
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase BAP1-like
KO
K08588
ubiquitin carboxyl-terminal hydrolase BAP1 [EC:
3.4.19.12
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115150231
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115150231
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115150231
03036 Chromosome and associated proteins [BR:
stru03036
]
115150231
Enzymes [BR:
stru01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115150231
Peptidases and inhibitors [BR:
stru01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
115150231
Ubiquitin system [BR:
stru04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
115150231
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
115150231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Motif
Other DBs
NCBI-GeneID:
115150231
NCBI-ProteinID:
XP_029549174
Ensembl:
ENSSTUG00000020086
LinkDB
All DBs
Position
16:18871405..18890582
Genome browser
AA seq
741 aa
AA seq
DB search
MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCPSPVYGFIFLFKWIEERRSRR
KVSTLVDETSVIDDDIVNDMFFAHQLIPNSCATHALLSVLLNCSGVELGTTLSRMKTFTK
GFGPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKDRL
FELDGLKAYPIDHGPWGEEEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRVK
YESKLEILKRNRQMVLEGLQQLIRVTQPELVQDRKHPDSSPSDDTPPTIKKEEADPQPVT
SQGAEQTPPTDTAAQSQSVPSPSGKGKAMGKPAAPLGGAGASQPVTSPIVPRLPAFLDNH
NYAKSPMQEDEDLATGVGRPRVPGAPQPPYSDDDDYEDEEEEEIGTPTRFRRKGVLRSRT
GRVGGGTGVETKLALGVLAEKLKKEVQRKDSLATPLSVRTEGRTGGIVITAASQPSPTPS
NESTDTASEIGSAFNSPLRSPARSQAATRPSSPVASHLSRVLFGEDEGLLRLDARQNRAV
RELGPSVSTALLHLQEDGVIYTVPPPADTALEEKAGTPEKVKEQGSNPAVEGDGVKEEGK
EGPSVEVEEIRETTEVKPSMEKVISTETVGSNKPSGEKYSPKELLALLKCVEADIANYEV
FLKEEVEKRKKYKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQNISVRRRQGVSIGR
LHKQRKPDRRKRSRPYKAKRQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagggtggctggagctcgagagtgacccggggctgttcacgctcttggtggag
gattttggtgtgaagggggtccaggtagaggagatatacgacctacaaagcaagtgtcca
agccccgtgtatggcttcatcttcctgttcaagtggattgaggagcgaaggtctaggagg
aaagtctccaccttggtggatgagacctctgtcattgatgatgacattgttaatgacatg
ttctttgcccaccagctgatcccaaactcctgcgccacccatgcacttctgagcgtgctc
ctgaactgtagtggggttgagttgggcactaccctcagccgcatgaagaccttcactaaa
ggcttcggcccagagagtaaaggctacgccattggaaatgccccagagctggctaaagca
cacaacagtcatgccagaccggagcccaggcacctgccggagaagcagaacgggattagc
gccgtgcggaccatggaagcattccactttgtcagctacgtgcccatcaaagaccgcttg
tttgagctagatggcctcaaggcgtaccccattgaccacgggccatggggagaggaggag
gagtggacggataaggcacggcgggtcattatggagaggattggcttggccacggctgga
gagccctaccatgatatccgcttcaacctgatggcagtggttccggaccgcagggtgaag
tatgagtcaaagctggagatcctgaagaggaacagacagatggtactggaggggctacag
cagctgatccgggtcacccagccagagcttgtacaggacaggaagcatccagactcctcc
ccctcagacgacacgccccctactatcaaaaaagaagaggcagaccctcaacctgttaca
tcacagggggctgagcagactcctcccacagacacagcagcccagtcccaatcggtcccg
agcccctcaggcaaggggaaagccatggggaaaccagctgctccattggggggagcgggg
gcctcccagcctgtcaccagccccatcgtccctcgcctaccagccttcttggacaaccac
aactacgccaagtcccccatgcaggaggatgaggaccttgcgacaggggtgggtcgtccc
cgggtgcccggtgcgccccagcccccctactctgatgacgatgactatgaggatgaagag
gaggaagagattggcacaccaaccaggttcaggcgtaaaggggtgctgcgttcccgtaca
ggccgtgtcgggggaggcaccggcgtagagaccaagctggcactcggcgtcctggccgag
aaactcaagaaggaagtccagaggaaggactctctggccacgccgctctccgtccgtacc
gagggccgcactgggggcatcgtgatcacggccgcctcccagccctcgcccacacccagc
aacgagagcaccgacacagcctctgagatcggcagtgccttcaactcaccactgcgctcc
ccggcccgctcccaagcggccacgcggccctccagccctgttgcgtcccacctgtcccgt
gtgttgtttggggaggatgagggtctactgaggctggatgccagacagaaccgggccgtc
agagagctggggccctccgtcagcaccgccctgctgcacctacaggaggacggggttata
tacactgtaccaccacccgctgatacagctcttgaagagaaggcaggcactccagagaag
gtaaaagagcaaggtagcaatccagcagtagagggggacggcgtgaaggaggaggggaag
gagggaccttcggtggaggtggaagagatcagagaaacaacagaggtcaaacccagcatg
gaaaaggtcatctccacggaaaccgttggaagcaacaagccatctggggaaaaatactct
cctaaagagctgcttgctctgctcaagtgtgtggaggctgacatcgccaactatgaagtg
tttctaaaggaggaggtggagaagaggaaaaaatacaagattgatgaccagaggaggacc
cataattatgacgagttcatctgcaccttcatatccatgctggcacaagaaggaatgttg
gccagtctggttgagcagaatatctctgtgcgtcgtcgccagggagtgagcatcggacgt
ttacacaaacagaggaaaccagaccgcaggaaacgctcgcgaccctacaaggccaagcgc
cagtga
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